RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 OTOSQ8NHW6 89 aa17.84■□□□□ 0.45
CCS-207ENST00000531990 RFKQ969G6 155 aa17.84■□□□□ 0.45
CCS-207ENST00000531990 ZNF799Q96GE5 643 aa17.84■□□□□ 0.45
CCS-207ENST00000531990 MBOAT4Q96T53 435 aa17.84■□□□□ 0.45
CCS-207ENST00000531990 CNN2Q99439 309 aaKnown RBP17.84■□□□□ 0.45
CCS-207ENST00000531990 KCNJ15Q99712 375 aa17.84■□□□□ 0.45
CCS-207ENST00000531990 YIPF3Q9GZM5 350 aa17.84■□□□□ 0.45
CCS-207ENST00000531990 SMPD3Q9NY59 655 aaPredicted RBP17.84■□□□□ 0.45
CCS-207ENST00000531990 STARD10Q9Y365 291 aa17.84■□□□□ 0.45
CCS-207ENST00000531990 IGHV3-13P01766 116 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 LCATP04180 440 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 LYNP07948 512 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 MRPL3P09001 348 aaKnown RBP17.83■□□□□ 0.44
CCS-207ENST00000531990 HSD11B1P28845 292 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 ALDH3B1P43353 468 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 EFNA4P52798 201 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 GRB2P62993 217 aaKnown RBP17.83■□□□□ 0.44
CCS-207ENST00000531990 LPCAT4Q643R3 524 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 SPATC1Q76KD6 591 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 RHOUQ7L0Q8 258 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 ZNF555Q8NEP9 628 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 MYEF2Q9P2K5 600 aaKnown RBP17.83■□□□□ 0.44
CCS-207ENST00000531990 WARS2Q9UGM6 360 aaKnown RBP17.83■□□□□ 0.44
CCS-207ENST00000531990 LAMP5Q9UJQ1 280 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 ITPR3Q14573 2671 aa17.83■□□□□ 0.44
CCS-207ENST00000531990 SSX4O60224 188 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 APOC1P02654 83 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 PEX2P28328 305 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 MPV17P39210 176 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 GGTLC2Q14390 218 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 MAD2L1BPQ15013 274 aaPredicted RBP17.82■□□□□ 0.44
CCS-207ENST00000531990 RSPO1Q2MKA7 263 aaPredicted RBP17.82■□□□□ 0.44
CCS-207ENST00000531990 DRAM2Q6UX65 266 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.82■□□□□ 0.44
CCS-207ENST00000531990 WFDC11Q8NEX6 87 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 RNF133Q8WVZ7 376 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 NEU4Q8WWR8 484 aaPredicted RBP17.82■□□□□ 0.44
CCS-207ENST00000531990 SORCS2Q96PQ0 1159 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 C1QTNF5Q9BXJ0 243 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 HAO2Q9NYQ3 351 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 TMEM14AQ9Y6G1 99 aa17.82■□□□□ 0.44
CCS-207ENST00000531990 MAP1AP78559 2803 aaPredicted RBP17.82■□□□□ 0.44
CCS-207ENST00000531990 LOC100130705A0A1B0GUX0 176 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 PLSCR5A0PG75 271 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 F12P00748 615 aaPredicted RBP17.81■□□□□ 0.44
CCS-207ENST00000531990 H2BFMP0C1H6 154 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 OTX1P32242 354 aaPredicted RBP17.81■□□□□ 0.44
CCS-207ENST00000531990 PRKXP51817 358 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 POU4F2Q12837 409 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 MALLQ13021 153 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 TMED1Q13445 227 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 ALKBH6Q3KRA9 238 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 COLCA1Q6ZS62 124 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 TGIF2LYQ8IUE0 185 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 KRTAP1-3Q8IUG1 177 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 ZNF283Q8N7M2 679 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 ZNF582Q96NG8 517 aaPredicted RBP17.81■□□□□ 0.44
CCS-207ENST00000531990 VCXQ9H320 206 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 SP140LQ9H930 580 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 CYSLTR2Q9NS75 346 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 FAM118AQ9NWS6 357 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 PTTG3PQ9NZH4 202 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 DNAJC27Q9NZQ0 273 aa17.81■□□□□ 0.44
CCS-207ENST00000531990 CGGBP1Q9UFW8 167 aaPredicted RBP17.81■□□□□ 0.44
CCS-207ENST00000531990 SNTNA6NMZ2 147 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 CASQ2O14958 399 aaPredicted RBP17.8■□□□□ 0.44
CCS-207ENST00000531990 TIMM8AO60220 97 aaPredicted RBP17.8■□□□□ 0.44
CCS-207ENST00000531990 MPZL2O60487 215 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 ALOX5APP20292 161 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 HTR1FP30939 366 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 ATP6V1E1P36543 226 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 LIPAP38571 399 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 SNRPGP62308 76 aaKnown RBP17.8■□□□□ 0.44
CCS-207ENST00000531990 CLEC12BQ2HXU8 276 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 MEDAGQ5VYS4 303 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 KCTD18Q6PI47 426 aaPredicted RBP17.8■□□□□ 0.44
CCS-207ENST00000531990 ZNF771Q7L3S4 317 aaPredicted RBP17.8■□□□□ 0.44
CCS-207ENST00000531990 ZCCHC24Q8N2G6 241 aaKnown RBP17.8■□□□□ 0.44
CCS-207ENST00000531990 CMBLQ96DG6 245 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 Q96MF0 132 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 AMELYQ99218 206 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 MNTQ99583 582 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 TPK1Q9H3S4 243 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 POFUT1Q9H488 388 aa17.8■□□□□ 0.44
CCS-207ENST00000531990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.8■□□□□ 0.44
CCS-207ENST00000531990 E9PQ18 207 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 SLC16A6O15403 523 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 NAT2P11245 290 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 RAC2P15153 192 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 OPRL1P41146 370 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 CX3CR1P49238 355 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 DSCR9P59020 149 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 SLC34A1Q06495 639 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 PSG7Q13046 419 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 ZMAT1Q5H9K5 638 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 SLC25A30Q5SVS4 291 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 CLEC2AQ6UVW9 174 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 FBXW12Q6X9E4 464 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 KRT77Q7Z794 578 aa17.79■□□□□ 0.44
CCS-207ENST00000531990 NAA40Q86UY6 237 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms