RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 INSIG1O15503 277 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 UPK1BO75841 260 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 TTC4O95801 387 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 HLA-AP01891 365 aaKnown RBP3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 RD3LP0DJH9 198 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 ZP3P21754 424 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 RPA3P35244 121 aaPredicted RBP3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 PAFAH1B2P68402 229 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 TGFBR3Q03167 851 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 ACVR1Q04771 509 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 STX5Q13190 355 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 ASAH1Q13510 395 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 PRR30Q53SZ7 412 aaPredicted RBP3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 NHLRC3Q5JS37 347 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 CEP85LQ5SZL2 805 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 FAM27D1Q5T7N8 215 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 FHL5Q5TD97 284 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 STPG1Q5TH74 334 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 ANKRD22Q5VYY1 191 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 NIPAL1Q6NVV3 410 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 CNIH2Q6PI25 160 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 CBR4Q8N4T8 237 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 Q8NBF4 154 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 OR2L2Q8NH16 312 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 OR6X1Q8NH79 312 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 CDC26Q8NHZ8 85 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 SYNPRQ8TBG9 265 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 PPP1R14BQ96C90 147 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 WDR34Q96EX3 536 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF597Q96LX8 424 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 PDCD1LG2Q9BQ51 273 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 C19orf24Q9BVV8 132 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 OSBPL11Q9BXB4 747 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 ZDHHC11Q9H8X9 412 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 PLGRKTQ9HBL7 147 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 ISYNA1Q9NPH2 558 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 ACOT13Q9NPJ3 140 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 TMEM9BQ9NQ34 198 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 IL17CQ9P0M4 197 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC7A11Q9UPY5 501 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 FLVCR1Q9Y5Y0 555 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 MAP3K15Q6ZN16 1313 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 TTC3P53804 2025 aa3.36□□□□□ -1.87
AC055878.1-201ENST00000531858 A0A087X002 238 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 OR6C70A6NIJ9 312 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF233A6NK53 670 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 FTCDNL1E5RQL4 147 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 K7N7A8 449 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 M0R1B8 84 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 SOCS3O14543 225 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 SYNGR1O43759 233 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 DUSP14O95147 198 aaKnown RBP3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 PSMG1O95456 288 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 CD8AP01732 235 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 APOEP02649 317 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF35P13682 527 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 MYL9P24844 172 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 HLA-DMAP28067 261 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 PSMB5P28074 263 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 AQP1P29972 269 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 GTF2H1P32780 548 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 NUTF2P61970 127 aaKnown RBP3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 CD164Q04900 197 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 STX4Q12846 297 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 BNIP2Q12982 314 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 GUSBP1Q15486 140 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNHIT3Q15649 155 aaPredicted RBP3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 COX19Q49B96 90 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 AKIRIN2Q53H80 203 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 Q6ZT83 130 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 FAM19A1Q7Z5A9 133 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF589Q86UQ0 364 aaPredicted RBP3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 FBXO16Q8IX29 292 aaPredicted RBP3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 TMEM156Q8N614 296 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 CHST4Q8NCG5 386 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 OR10W1Q8NGF6 305 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 OR5L1Q8NGL2 311 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 OR5AR1Q8NGP9 310 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 OR51Q1Q8NH59 317 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 OR51E1Q8TCB6 317 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 DYNC2LI1Q8TCX1 351 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 VOPP1Q96AW1 172 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF778Q96MU6 729 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 NOL4LQ96MY1 436 aaPredicted RBP3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 COL21A1Q96P44 957 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 VAT1Q99536 393 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 RASL11BQ9BPW5 248 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC29A3Q9BZD2 475 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF442Q9H7R0 627 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 TRIM45Q9H8W5 580 aaPredicted RBP3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 MIEF1Q9NQG6 463 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ABCB10Q9NRK6 738 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ATPIF1Q9UII2 106 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 KLHL21Q9UJP4 597 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 TFR2Q9UP52 801 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 PRG3Q9Y2Y8 225 aaPredicted RBP3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 SNX24Q9Y343 169 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 ELP1O95163 1332 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 RAB3GAP2Q9H2M9 1393 aa3.35□□□□□ -1.87
AC055878.1-201ENST00000531858 RBMY1BA6NDE4 496 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms