RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 HPF1Q9NWY4 346 aa4.94□□□□□ -1.62
PCF11-205ENST00000530906 ANKRD10Q9NXR5 420 aa4.94□□□□□ -1.62
PCF11-205ENST00000530906 B3GAT1Q9P2W7 334 aa4.94□□□□□ -1.62
PCF11-205ENST00000530906 MTFP1Q9UDX5 166 aa4.94□□□□□ -1.62
PCF11-205ENST00000530906 OR52A1Q9UKL2 312 aa4.94□□□□□ -1.62
PCF11-205ENST00000530906 RCE1Q9Y256 329 aa4.94□□□□□ -1.62
PCF11-205ENST00000530906 N6AMT1Q9Y5N5 214 aa4.94□□□□□ -1.62
PCF11-205ENST00000530906 TRAV8-7A0A075B6U6 113 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 TMEM269A0A1B0GVZ9 245 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 A0A1W2PPK0 400 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 METTL21EPA6NDL7 271 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 DHRS7CA6NNS2 312 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 C4orf47A7E2U8 309 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 C17orf51A8MQB3 221 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 SNRPGP15A8MWD9 76 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 H3BML4 177 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 M0R296 226 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 PSMD9O00233 223 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 LANCL1O43813 399 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 EFNA2O43921 213 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 GMFGO60234 142 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ATP6V1G1O75348 118 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 RBBP9O75884 186 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 STK17BO94768 372 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 BPNT1O95861 308 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 PDGFBP01127 241 aaPredicted RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 P04436 131 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 IL5P05113 134 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 MELTFP08582 738 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 CD3GP09693 182 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 UBBP0CG47 229 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ANXA3P12429 323 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 HLA-DOBP13765 273 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 CPN1P15169 458 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ZNF28P17035 718 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 TBPP20226 339 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 PSMB1P20618 241 aaKnown RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 C4BPBP20851 252 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 MSR1P21757 451 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 CCL1P22362 96 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 S100A1P23297 94 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 CDK2P24941 298 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 HTR2CP28335 458 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 SOX2P48431 317 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 GZMKP49863 264 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 SUCLG1P53597 346 aaKnown RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 RAC3P60763 192 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 RPS15P62841 145 aaKnown RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 GABREP78334 506 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ECH1Q13011 328 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 TNK1Q13470 666 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ARL6IP1Q15041 203 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 CDK10Q15131 360 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ZMYND11Q15326 602 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 RBMS2Q15434 407 aaKnown RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 STK11Q15831 433 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 PDSS1Q5T2R2 415 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 OR5M10Q6IEU7 315 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 OR7E24Q6IFN5 339 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 LCN10Q6JVE6 187 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ZNF529Q6P280 563 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 SLC25A47Q6Q0C1 308 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 C16orf47Q6ZP98 133 aaPredicted RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 PGAP1Q75T13 922 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ADGRE4PQ86SQ3 457 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 LUZP2Q86TE4 346 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 SERPINA12Q8IW75 414 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 SLC22A24Q8N4F4 322 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ESX1Q8N693 406 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ASCC1Q8N9N2 400 aaKnown RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 OR5D14Q8NGL3 314 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 OR13C3Q8NGS6 347 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ZFAND1Q8TCF1 268 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 C11orf40Q8WZ69 217 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 FAM3DQ96BQ1 224 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 SLAMF6Q96DU3 332 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 RADILQ96JH8 1075 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 AMELYQ99218 206 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 GHITMQ9H3K2 345 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 GPN1Q9HCN4 374 aaPredicted RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 TMEM138Q9NPI0 162 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 G6PC2Q9NQR9 355 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 FAM206AQ9NX38 181 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 MED29Q9NX70 200 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ABI3Q9P2A4 366 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ZNF391Q9UJN7 358 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 DKKL1Q9UK85 242 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 TCFL5Q9UL49 500 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 ING4Q9UNL4 249 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 MRPS7Q9Y2R9 242 aaKnown RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 POLR1DQ9Y2S0 133 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 POLR3KQ9Y2Y1 108 aaPredicted RBP4.93□□□□□ -1.62
PCF11-205ENST00000530906 EMC9Q9Y3B6 208 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 LOXL2Q9Y4K0 774 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 PCDHGA1Q9Y5H4 931 aa4.93□□□□□ -1.62
PCF11-205ENST00000530906 PCNX3Q9H6A9 2034 aa4.92□□□□□ -1.62
PCF11-205ENST00000530906 COL27A1Q8IZC6 1860 aaPredicted RBP4.92□□□□□ -1.62
PCF11-205ENST00000530906 CCDC187A0A096LP49 1063 aa4.92□□□□□ -1.62
PCF11-205ENST00000530906 A0A0U1RQV5 110 aa4.92□□□□□ -1.62
PCF11-205ENST00000530906 OR14I1A6ND48 311 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms