RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CD84Q9UIB8 345 aa4.43□□□□□ -1.7
CAPRIN1-208ENST00000530008 ZNF229Q9UJW7 825 aa4.43□□□□□ -1.7
CAPRIN1-208ENST00000530008 PSG8Q9UQ74 426 aa4.43□□□□□ -1.7
CAPRIN1-208ENST00000530008 AQRO60306 1485 aaKnown RBP eCLIP4.43□□□□□ -1.7
CAPRIN1-208ENST00000530008 RAB19A4D1S5 217 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 FAM166BA8MTA8 275 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 PDZK1P1A8MUH7 402 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 VAPBO95292 243 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 HTR2CP28335 458 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 NMUP48645 174 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 CSNK1A1P48729 337 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 CYB561P49447 251 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 GPR176Q14439 515 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 ATP6V1FQ16864 119 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 C18orf21Q32NC0 220 aaPredicted RBP4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 CHRFAM7AQ494W8 412 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 PIGGQ5H8A4 983 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 TMPRSS11AQ6ZMR5 421 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 OR51G1Q8NGK1 321 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 SGTBQ96EQ0 304 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 ZBED3Q96IU2 234 aaPredicted RBP4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 SLC25A2Q9BXI2 301 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 STMN3Q9NZ72 180 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 TRMT112Q9UI30 125 aaKnown RBP4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 KIF25-AS1Q9Y6Z4 181 aa4.42□□□□□ -1.7
CAPRIN1-208ENST00000530008 SYCE1LA8MT33 242 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 IGKV3-15P01624 115 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 OR8U9P0C7N5 309 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 PFN2P35080 140 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 DEKP35659 375 aaKnown RBP4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 CXCL5P42830 114 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 CRISP3P54108 245 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 HERVK_113P61574 105 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 RSPO1Q2MKA7 263 aaPredicted RBP4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 TMEM255AQ5JRV8 349 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 DNAJC24Q6P3W2 148 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 FBXW12Q6X9E4 464 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 SYCE1Q8N0S2 351 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 WDR31Q8NA23 367 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 MDS2Q8NDY4 140 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 OR10W1Q8NGF6 305 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 OR8U1Q8NH10 309 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 ZFP90Q8TF47 636 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 MRGPRFQ96AM1 343 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 RCN3Q96D15 328 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 RNF185Q96GF1 192 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 CENPNQ96H22 339 aaPredicted RBP4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 KCNS3Q9BQ31 491 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 TREM1Q9NP99 234 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 SLC17A7Q9P2U7 560 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 V9GYY9 64 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 CAMTA1Q9Y6Y1 1673 aa4.41□□□□□ -1.7
CAPRIN1-208ENST00000530008 SBNO1A3KN83 1393 aa4.4□□□□□ -1.7
CAPRIN1-208ENST00000530008 ANKRD63C9JTQ0 380 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 E7EWF7 191 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 SLC16A7O60669 478 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 LCA5LO95447 670 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 CD37P11049 281 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 OMGP23515 440 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 UCNP55089 124 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 AP1S2P56377 157 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 TAS2R39P59534 338 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 RPS23P62266 143 aaKnown RBP4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 PAFAH1B2P68402 229 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 SLC35B1P78383 322 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 NDPQ00604 133 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 PSG7Q13046 419 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 DGCR6Q14129 220 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 RNF212Q495C1 297 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 HES5Q5TA89 166 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 ARL9Q6T311 187 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 PLET1Q6UQ28 207 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 C6orf120Q7Z4R8 191 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 SYS1Q8N2H4 156 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 C11orf72Q8NBR9 251 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR6K6Q8NGW6 343 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 NTAN1Q96AB6 310 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 PHYHIPLQ96FC7 376 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 ZNF681Q96N22 645 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 CHRNA10Q9GZZ6 450 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 PARP12Q9H0J9 701 aaKnown RBP4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 CDC42EP4Q9H3Q1 356 aaKnown RBP4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 ISYNA1Q9NPH2 558 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 FAM49BQ9NUQ9 324 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 CHMP5Q9NZZ3 219 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 GGA2Q9UJY4 613 aa4.4□□□□□ -1.71
CAPRIN1-208ENST00000530008 FHOD3Q2V2M9 1422 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 LAD1O00515 517 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 CDC40O60508 579 aaKnown RBP eCLIP4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 CD3GP09693 182 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 CD9P21926 228 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 P2RX1P51575 399 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 XRCC4Q13426 336 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 RGNQ15493 299 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR6N2Q8NGY6 317 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 TMEM158Q8WZ71 300 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 RGP1Q92546 391 aaPredicted RBP4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 BTN2A3PQ96KV6 586 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 NAPGQ99747 312 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms