RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 HAVCR1Q96D42 359 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 SAMD8Q96LT4 415 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 ERMAPQ96PL5 475 aaPredicted RBP8.87□□□□□ -0.99
CPSF1-203ENST00000527916 ARL8BQ9NVJ2 186 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 PURGQ9UJV8 347 aaKnown RBP8.87□□□□□ -0.99
CPSF1-203ENST00000527916 AUP1Q9Y679 476 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 ISPDA4D126 451 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 ARPC2O15144 300 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 CRYBA1P05813 215 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 RAC2P15153 192 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 OMGP23515 440 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 MSX2P35548 267 aaPredicted RBP8.86□□□□□ -0.99
CPSF1-203ENST00000527916 SPIBQ01892 262 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 GLO1Q04760 184 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 TSPAN31Q12999 210 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 ZBTB46Q86UZ6 589 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 ZDHHC21Q8IVQ6 265 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 DEFB107AQ8IZN7 70 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 BCL6BQ8N143 479 aaPredicted RBP8.86□□□□□ -0.99
CPSF1-203ENST00000527916 OR6V1Q8N148 313 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 ARHGAP24Q8N264 748 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 LINC00471Q8N535 108 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 DEFB108BQ8NET1 73 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 OR5L1Q8NGL2 311 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 GNPDA2Q8TDQ7 276 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 CCL17Q92583 94 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 GTF3AQ92664 365 aaKnown RBP8.86□□□□□ -0.99
CPSF1-203ENST00000527916 ZNF48Q96MX3 618 aaPredicted RBP8.86□□□□□ -0.99
CPSF1-203ENST00000527916 MRI1Q9BV20 369 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 TRIM15Q9C019 465 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 OR52D1Q9H346 318 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 UBAP1Q9NZ09 502 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 ACTR3BQ9P1U1 418 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 ASH2LQ9UBL3 628 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 IL19Q9UHD0 177 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 IL20RAQ9UHF4 553 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 TMCC3Q9ULS5 477 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 B9D1Q9UPM9 204 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 STARD10Q9Y365 291 aa8.86□□□□□ -0.99
CPSF1-203ENST00000527916 IGLV1-36A0A0B4J1U3 117 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 DCTN6O00399 190 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 RER1O15258 196 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 TIMM8AO60220 97 aaPredicted RBP8.85□□□□□ -0.99
CPSF1-203ENST00000527916 OR10H3O60404 316 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 PPP1R3DO95685 299 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 RENP00797 406 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 TNFRSF1AP19438 455 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 TNFSF4P23510 183 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 RRM2P31350 389 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 GYS2P54840 703 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 TNFAIP6P98066 277 aaPredicted RBP8.85□□□□□ -0.99
CPSF1-203ENST00000527916 SRSF4Q08170 494 aaKnown RBP8.85□□□□□ -0.99
CPSF1-203ENST00000527916 COX10Q12887 443 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 ZNF154Q13106 437 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 SLC36A3Q495N2 470 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 RPL13AP3Q6NVV1 102 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 SLC27A4Q6P1M0 643 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 FBXW12Q6X9E4 464 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 COLCA1Q6ZS62 124 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 ZNF771Q7L3S4 317 aaPredicted RBP8.85□□□□□ -0.99
CPSF1-203ENST00000527916 JAZF1Q86VZ6 243 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 KIR3DL3Q8N743 410 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 FANK1Q8TC84 345 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 TAF15Q92804 592 aaKnown RBP eCLIP8.85□□□□□ -0.99
CPSF1-203ENST00000527916 CMBLQ96DG6 245 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 TSSK2Q96PF2 358 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 COQ7Q99807 217 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 CITED1Q99966 193 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 HDHD2Q9H0R4 259 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 MUC13Q9H3R2 512 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 RERGLQ9H628 205 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 MSL2Q9HCI7 577 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 SRA1Q9HD15 236 aaKnown RBP8.85□□□□□ -0.99
CPSF1-203ENST00000527916 CACNG2Q9Y698 323 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 V9GYQ6 96 aa8.85□□□□□ -0.99
CPSF1-203ENST00000527916 IFNL4K9M1U5 179 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 SURF4O15260 269 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 HIST1H1CP16403 213 aaKnown RBP8.84□□□□□ -0.99
CPSF1-203ENST00000527916 CPT2P23786 658 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 NOS3P29474 1203 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 MAGEA2P43356 314 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 RAG2P55895 527 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 MXRA7P84157 204 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 ECH1Q13011 328 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 RSPO1Q2MKA7 263 aaPredicted RBP8.84□□□□□ -0.99
CPSF1-203ENST00000527916 KRTAP27-1Q3LI81 207 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 KLF17Q5JT82 389 aaPredicted RBP8.84□□□□□ -0.99
CPSF1-203ENST00000527916 OLFML2AQ68BL7 652 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 PGBD2Q6P3X8 592 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 ZNF620Q6ZNG0 422 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 Q6ZR03 302 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 C1QL4Q86Z23 238 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 FITM2Q8N6M3 262 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 ZNF283Q8N7M2 679 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 SLC26A10Q8NG04 563 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 SLC7A6Q92536 515 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 APOBEC3DQ96AK3 386 aaPredicted RBP8.84□□□□□ -0.99
CPSF1-203ENST00000527916 NSL1Q96IY1 281 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 NMNAT3Q96T66 252 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 RBM4BQ9BQ04 359 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms