RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 COG8Q96MW5 612 aa13.76□□□□□ -0.21
TSPAN4-213ENST00000524895 ZNF75AQ96N20 296 aa13.76□□□□□ -0.21
TSPAN4-213ENST00000524895 MGLLQ99685 303 aa13.76□□□□□ -0.21
TSPAN4-213ENST00000524895 MOB1AQ9H8S9 216 aa13.76□□□□□ -0.21
TSPAN4-213ENST00000524895 BRD7Q9NPI1 651 aa13.76□□□□□ -0.21
TSPAN4-213ENST00000524895 CRNNQ9UBG3 495 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-213ENST00000524895 PCNX1Q96RV3 2341 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 LOC100509620A0A075B734 347 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 IGHV1-18A0A0C4DH31 117 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 J3QKU1 62 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 IGLV1-44P01699 117 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 ANXA2P07355 339 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 ACSM4P0C7M7 580 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 CECR9P0C854 216 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 CCL2P13500 99 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 JUNBP17275 347 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 TGM4P49221 684 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 GTF2A1P52655 376 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 NR1H2P55055 460 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 ZNF121P58317 390 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 MFGE8Q08431 387 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 ACSM1Q08AH1 577 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 MLLT11Q13015 90 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 KRTAP27-1Q3LI81 207 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 C3orf36Q3SXR2 165 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 CCDC58Q4VC31 144 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 ARMCX4Q5H9R4 360 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 BCL2L15Q5TBC7 163 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 RPL22L1Q6P5R6 122 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 DRAM2Q6UX65 266 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 MYPOPQ86VE0 399 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 ZFP41Q8N8Y5 198 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 UFD1Q92890 307 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 POM121L2Q96KW2 1035 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 WFIKKN1Q96NZ8 548 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 OPALINQ96PE5 141 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 DCLRE1CQ96SD1 692 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 CDH20Q9HBT6 801 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 ISYNA1Q9NPH2 558 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 FAM206AQ9NX38 181 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 NPAP1Q9NZP6 1156 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 N6AMT1Q9Y5N5 214 aa13.75□□□□□ -0.21
TSPAN4-213ENST00000524895 PNMA8CA0A1B0GUJ8 204 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 TUBAL3A6NHL2 446 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 THBDP07204 575 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 SLC2A1P11166 492 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 MMP16P51512 607 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 SNTB1Q13884 538 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 CDK5R1Q15078 307 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 TSTQ16762 297 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 RSPO1Q2MKA7 263 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 SYT6Q5T7P8 510 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 C22orf34Q6ZV56 151 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 OR2G2Q8NGZ5 317 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 SP140LQ9H930 580 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 NGBQ9NPG2 151 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 NPDC1Q9NQX5 325 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 ST6GALNAC2Q9UJ37 374 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 OR52A1Q9UKL2 312 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 DIDO1Q9BTC0 2240 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 MYO18BQ8IUG5 2567 aa13.74□□□□□ -0.21
TSPAN4-213ENST00000524895 TRBV2A0A0J9YWF9 115 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 PNPP00491 289 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 LCATP04180 440 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 TFAP2AP05549 437 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 CELP19835 753 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 PEX19P40855 299 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 RPL5P46777 297 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 GP2P55259 537 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 NANOS3P60323 173 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 HGFACQ04756 655 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 ALKBH1Q13686 389 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 WDR38Q5JTN6 314 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 LIPKQ5VXJ0 399 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 FDX2Q6P4F2 183 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 ARL9Q6T311 187 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 SEZ6L2Q6UXD5 910 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 TMEM108Q6UXF1 575 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 FAM57BQ71RH2 274 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 CATSPERDQ86XM0 798 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 PRSS35Q8N3Z0 413 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 LINC01560Q8TB33 94 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 SSC4DQ8WTU2 575 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 RNF166Q96A37 237 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 SMIM19Q96E16 107 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 PGAM5Q96HS1 289 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 C4orf45Q96LM5 186 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 KCNS3Q9BQ31 491 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 PBOV1Q9GZY1 135 aa13.73□□□□□ -0.21
TSPAN4-213ENST00000524895 WIPF3A6NGB9 483 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 ACOD1A6NK06 481 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 TBX1O43435 398 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 RNF224P0DH78 156 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 KIR3DL2P43630 455 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 RGS6P49758 472 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 CCR9P51686 369 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 SLC3A1Q07837 685 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 NAA40Q86UY6 237 aa13.72□□□□□ -0.21
TSPAN4-213ENST00000524895 PAQR4Q8N4S7 273 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms