RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 OSGIN1Q9UJX0 560 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 RPS6KA6Q9UK32 745 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 GTF2A1LQ9UNN4 478 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 SPIN1Q9Y657 262 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 TANC2Q9HCD6 1990 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 IGLV3-9A0A075B6K5 115 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 TMED7-TICAM2A0A0A6YYA0 188 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 TRAV40A0A0B4J280 105 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 A0A0G2JPF8 293 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 A0A1W2PPW3 197 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 CLDN24A6NM45 220 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 A8MXK9 166 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 HNRNPCL2B2RXH8 293 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 HNRNPCL3B7ZW38 293 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 K7EIL1 84 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 HMGN4O00479 90 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF208O43345 1280 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 KRT33AO76009 404 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 CSTAP01040 98 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 C1QCP02747 245 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 CRYBA1P05813 215 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 MELTFP08582 738 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 HNRNPCL4P0DMR1 293 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF26P17031 533 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 MATN1P21941 496 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 FASP25445 335 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 CHI3L1P36222 383 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 VHLP40337 213 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF81P51508 661 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 CRYBA2P53672 197 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 ERVS71-1P61550 626 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 CDK6Q00534 326 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 GNA13Q14344 377 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 OR7A5Q15622 319 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 GPR68Q15743 365 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 ATP6AP1Q15904 470 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 CYP51A1Q16850 503 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 FAM98BQ52LJ0 330 aaKnown RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 GCNT6Q5T4J0 391 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 REEP3Q6NUK4 255 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 Q6ZSV7 163 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 HMGN2P46Q86SG4 172 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 PATL1Q86TB9 770 aaKnown RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 GPAT4Q86UL3 456 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 RNF130Q86XS8 419 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF584Q8IVC4 421 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 LNX2Q8N448 690 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 PAQR4Q8N4S7 273 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 PACRGLQ8N7B6 248 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 SLC38A5Q8WUX1 472 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 OIT3Q8WWZ8 545 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 RAB1CQ92928 201 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 UPRTQ96BW1 309 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 NRBF2Q96F24 287 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 C7orf34Q96L11 122 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 TRNT1Q96Q11 434 aaKnown RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 OR7D2Q96RA2 312 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 CHID1Q9BWS9 393 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 ACTRT3Q9BYD9 372 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 KRTAP1-5Q9BYS1 174 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 WDR12Q9GZL7 423 aaKnown RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 VCX3BQ9H321 246 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 GAR1Q9NY12 217 aaKnown RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 NKIRAS2Q9NYR9 191 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 MKLN1Q9UL63 735 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 ZDHHC8Q9ULC8 765 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 FAF1Q9UNN5 650 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 SAMD4AQ9UPU9 718 aaKnown RBP5.51□□□□□ -1.53
SDCBP-210ENST00000522843 TMED7Q9Y3B3 224 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 STAB2Q8WWQ8 2551 aa5.51□□□□□ -1.53
SDCBP-210ENST00000522843 RNF103-CHMP3A0A140T963 221 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 F5H0A9 414 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 M0QX08 132 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 DHHO43323 396 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 PIP5K1CO60331 668 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 PROP1O75360 226 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 SLC43A1O75387 559 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 MFN2O95140 757 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 PPP1R3DO95685 299 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 AK1P00568 194 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 IGHV2-70P01814 119 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 ETFAP13804 333 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 NCK1P16333 377 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 FKBP2P26885 142 aaKnown RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 TACR3P29371 465 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 CRATP43155 626 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 IDH2P48735 452 aaKnown RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 SH3BGRP55822 239 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 DSTNP60981 165 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 PIGFQ07326 219 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 SCARB2Q14108 478 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 HABP2Q14520 560 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 TSTQ16762 297 aaKnown RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 CEACAM16Q2WEN9 425 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 ARHGAP11BQ3KRB8 267 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 LRRC74BQ6ZQY2 392 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 ARMC8Q8IUR7 673 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 KDM8Q8N371 416 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 OR10S1Q8NGN2 331 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF563Q8TA94 476 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms