RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 IL32P24001 234 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 PSMA1P25786 263 aaKnown RBP11.39□□□□□ -0.59
CPNE3-205ENST00000522240 GABRA5P31644 462 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 ASCL1P50553 236 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 CCR9P51686 369 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 ADORA2A-AS1P86434 159 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 ALKBH1Q13686 389 aaKnown RBP11.39□□□□□ -0.59
CPNE3-205ENST00000522240 TAF13Q15543 124 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 GSG1Q2KHT4 349 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 KRTAP27-1Q3LI81 207 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 TIMM50Q3ZCQ8 353 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 C4orf17Q53FE4 359 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 LIPKQ5VXJ0 399 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 STAC2Q6ZMT1 411 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 SPATC1Q76KD6 591 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 P2RY8Q86VZ1 359 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 LIX1LQ8IVB5 337 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 ALDH16A1Q8IZ83 802 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 STEAP2Q8NFT2 490 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 OR2G2Q8NGZ5 317 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 OR1F12Q8NHA8 337 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF420Q8TAQ5 688 aaPredicted RBP11.39□□□□□ -0.59
CPNE3-205ENST00000522240 FGFBP3Q8TAT2 258 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 SPTSSAQ969W0 71 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 C4orf45Q96LM5 186 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 DOK1Q99704 481 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 BCL7BQ9BQE9 202 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 FAM192AQ9GZU8 254 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 RNF121Q9H920 327 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 COQ3Q9NZJ6 369 aa11.39□□□□□ -0.59
CPNE3-205ENST00000522240 USP9XQ93008 2570 aaPredicted RBP11.39□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF503-AS2A6NEH8 195 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 A6NHS1 94 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 ACOD1A6NK06 481 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 TMEM212A6NML5 194 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 LOC110117498-PIK3R3F6TDL0 507 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 GPRIN2O60269 458 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 RPP14O95059 124 aaKnown RBP11.38□□□□□ -0.59
CPNE3-205ENST00000522240 GABARAPO95166 117 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 CELP19835 753 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 PSMB10P40306 273 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 HTR5AP47898 357 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 GDI2P50395 445 aaKnown RBP11.38□□□□□ -0.59
CPNE3-205ENST00000522240 GTF2A1P52655 376 aaPredicted RBP11.38□□□□□ -0.59
CPNE3-205ENST00000522240 RAB1AP62820 205 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 PLP2Q04941 152 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 TRAM1Q15629 374 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 FBXL19-AS1Q494R0 122 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 PABPC1L2AQ5JQF8 200 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 TIMM23BQ5SRD1 257 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF774Q6NX45 483 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 SSX8Q7RTT4 187 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 FJX1Q86VR8 437 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 CATSPERDQ86XM0 798 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 ANKRD13BQ86YJ7 626 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 ZFP41Q8N8Y5 198 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 CCDC120Q96HB5 630 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 PGLYRP3Q96LB9 341 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 FUNDC2Q9BWH2 189 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 NOX3Q9HBY0 568 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 FAM206AQ9NX38 181 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 NUFIP1Q9UHK0 495 aaKnown RBP11.38□□□□□ -0.59
CPNE3-205ENST00000522240 ENPP5Q9UJA9 477 aa11.38□□□□□ -0.59
CPNE3-205ENST00000522240 SIRT4Q9Y6E7 314 aaPredicted RBP11.38□□□□□ -0.59
CPNE3-205ENST00000522240 TRBV2A0A0J9YWF9 115 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 IQCMA0A1B0GVH7 501 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF701M0R085 212 aaPredicted RBP11.37□□□□□ -0.59
CPNE3-205ENST00000522240 M0R135 149 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 NOL3O60936 208 aaKnown RBP11.37□□□□□ -0.59
CPNE3-205ENST00000522240 PATE4P0C8F1 98 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 GALP22466 123 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 GNLYP22749 145 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 CCKARP32238 428 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 CX3CR1P49238 355 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 TPTEP56180 551 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 NANOS3P60323 173 aaKnown RBP11.37□□□□□ -0.59
CPNE3-205ENST00000522240 MFGE8Q08431 387 aaPredicted RBP11.37□□□□□ -0.59
CPNE3-205ENST00000522240 WDR38Q5JTN6 314 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 ARL9Q6T311 187 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 DRAM2Q6UX65 266 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 MDP1Q86V88 176 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 CLVS1Q8IUQ0 354 aaPredicted RBP11.37□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF283Q8N7M2 679 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 FAM169BQ8N8A8 192 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 WDR31Q8NA23 367 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 IL17RDQ8NFM7 739 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 AKR7LQ8NHP1 331 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 HSD17B8Q92506 261 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF799Q96GE5 643 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 ZNF75AQ96N20 296 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 DCLRE1CQ96SD1 692 aaKnown RBP11.37□□□□□ -0.59
CPNE3-205ENST00000522240 COMMD4Q9H0A8 199 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 SP140LQ9H930 580 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 SF3B6Q9Y3B4 125 aaKnown RBP11.37□□□□□ -0.59
CPNE3-205ENST00000522240 CEPT1Q9Y6K0 416 aa11.37□□□□□ -0.59
CPNE3-205ENST00000522240 PNMA8CA0A1B0GUJ8 204 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 TMEM269A0A1B0GVZ9 245 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 OR4C45A6NMZ5 311 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 PNPP00491 289 aa11.36□□□□□ -0.59
CPNE3-205ENST00000522240 IGKV3-15P01624 115 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms