RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PNRC2Q9NPJ4 139 aaKnown RBP12.74□□□□□ -0.37
CLN8-204ENST00000519254 FAM206AQ9NX38 181 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 CLCF1Q9UBD9 225 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 TBC1D24Q9ULP9 559 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 RCE1Q9Y256 329 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 V9GY05 133 aa12.74□□□□□ -0.37
CLN8-204ENST00000519254 FREM1Q5H8C1 2179 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 IGKV3D-15A0A087WSY6 115 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 ARPC4-TTLL3A0A0A6YYG9 625 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 AIPO00170 330 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 RER1O15258 196 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 DOK2O60496 412 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 ISG15P05161 165 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 ASPHD2Q6ICH7 369 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 RHOUQ7L0Q8 258 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 GCNT2Q8N0V5 402 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 OR4M1Q8NGD0 313 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 TSEN15Q8WW01 171 aaKnown RBP12.73□□□□□ -0.37
CLN8-204ENST00000519254 ASB5Q8WWX0 329 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 SLITRK2Q9H156 845 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 SP140LQ9H930 580 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 BRD7Q9NPI1 651 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 EXTL2Q9UBQ6 330 aa12.73□□□□□ -0.37
CLN8-204ENST00000519254 SVILO95425 2214 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 BSNQ9UPA5 3926 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 A0A1W2PQ09 198 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 ZNF878C9JN71 531 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 SLC43A1O75387 559 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 MRPL33O75394 65 aaKnown RBP12.72□□□□□ -0.37
CLN8-204ENST00000519254 SPNP16150 400 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 MSR1P21757 451 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 IL18Q14116 193 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 ENDOGQ14249 297 aaKnown RBP12.72□□□□□ -0.37
CLN8-204ENST00000519254 HES5Q5TA89 166 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 PCSK4Q6UW60 755 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 C3P1Q6ZMU1 363 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 ADGRE4PQ86SQ3 457 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 THRSPQ92748 146 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 RBM24Q9BX46 236 aaKnown RBP12.72□□□□□ -0.37
CLN8-204ENST00000519254 ULBP2Q9BZM5 246 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 NELFAQ9H3P2 528 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 TBCCD1Q9NVR7 557 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 SPATA2Q9UM82 520 aa12.72□□□□□ -0.37
CLN8-204ENST00000519254 A0A0G2JMP0 313 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 A0A0X1KG70 313 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 AHRRA9YTQ3 701 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 PTTG1O95997 202 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 YES1P07947 543 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 ACHEP22303 614 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 DEFA1P59665 94 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 DEFA3P59666 94 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 BCL2L15Q5TBC7 163 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 KLHL24Q6TFL4 600 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 ZNF704Q6ZNC4 412 aaPredicted RBP12.71□□□□□ -0.37
CLN8-204ENST00000519254 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 OR4M2Q8NGB6 313 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 FAM57AQ8TBR7 257 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 LGALS14Q8TCE9 139 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 TMEM45BQ96B21 275 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 KCNJ15Q99712 375 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 C12orf49Q9H741 205 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 RNF122Q9H9V4 155 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 BCO1Q9HAY6 547 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
CLN8-204ENST00000519254 ACACBO00763 2458 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 LOC107986453A0A1B0GWG9 222 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 A6NIN4 97 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 FIGNL2A6NMB9 653 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 ZNF724A8MTY0 619 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 APOA1P02647 267 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 TTRP02766 147 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 MAS1P04201 325 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 GUCA1AP43080 201 aaPredicted RBP12.71□□□□□ -0.38
CLN8-204ENST00000519254 LINGO2Q7L985 606 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 ELMOD2Q8IZ81 293 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 GPR137CQ8N3F9 429 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 Q8N402 240 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 DTX3Q8N9I9 347 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 C9orf106Q8NAJ2 232 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 DNAAF1Q8NEP3 725 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 SETD6Q8TBK2 473 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 ALKBH3Q96Q83 286 aaPredicted RBP12.71□□□□□ -0.38
CLN8-204ENST00000519254 PBOV1Q9GZY1 135 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 DDX28Q9NUL7 540 aaKnown RBP12.71□□□□□ -0.38
CLN8-204ENST00000519254 HHLA2Q9UM44 414 aa12.71□□□□□ -0.38
CLN8-204ENST00000519254 MAP1BP46821 2468 aaKnown RBP12.7□□□□□ -0.38
CLN8-204ENST00000519254 P2RY10O00398 339 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 WDR1O75083 606 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 TMEM127O75204 238 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 KRT33AO76009 404 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 ACSM4P0C7M7 580 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 AGTR1P30556 359 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 ZNF84P51523 738 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 PSMA6P60900 246 aaKnown RBP12.7□□□□□ -0.38
CLN8-204ENST00000519254 HIST1H3AP68431 136 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 MRPS34P82930 218 aaKnown RBP12.7□□□□□ -0.38
CLN8-204ENST00000519254 SCN1BQ07699 218 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 TAB1Q15750 504 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms