RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 KIFAP3Q92845 792 aa0.81□□□□□ -2.28
PCM1-208ENST00000518877 STMN2Q93045 179 aa0.81□□□□□ -2.28
PCM1-208ENST00000518877 TCEAL3Q969E4 200 aa0.81□□□□□ -2.28
PCM1-208ENST00000518877 DNAJC1Q96KC8 554 aaKnown RBP0.81□□□□□ -2.28
PCM1-208ENST00000518877 ZNF317Q96PQ6 595 aaPredicted RBP0.81□□□□□ -2.28
PCM1-208ENST00000518877 MICU1Q9BPX6 476 aa0.81□□□□□ -2.28
PCM1-208ENST00000518877 RSG1Q9BU20 258 aa0.81□□□□□ -2.28
PCM1-208ENST00000518877 OR51M1Q9H341 326 aa0.81□□□□□ -2.28
PCM1-208ENST00000518877 PISDQ9UG56 409 aa0.81□□□□□ -2.28
PCM1-208ENST00000518877 TRMT112Q9UI30 125 aaKnown RBP0.81□□□□□ -2.28
PCM1-208ENST00000518877 CSDC2Q9Y534 153 aaKnown RBP0.81□□□□□ -2.28
PCM1-208ENST00000518877 R4GN34 69 aa0.81□□□□□ -2.28
PCM1-208ENST00000518877 COL11A1P12107 1806 aaPredicted RBP0.8□□□□□ -2.28
PCM1-208ENST00000518877 IGKV1-27A0A075B6S5 117 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 A0A0J9YXV3 536 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.8□□□□□ -2.28
PCM1-208ENST00000518877 RAB29O14966 203 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 PABPC4LP0CB38 370 aaKnown RBP0.8□□□□□ -2.28
PCM1-208ENST00000518877 CHMLP26374 656 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 POLR2IP36954 125 aaKnown RBP0.8□□□□□ -2.28
PCM1-208ENST00000518877 TNFSF9P41273 254 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 CRYBB2P43320 205 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 TMED10P49755 219 aaKnown RBP0.8□□□□□ -2.28
PCM1-208ENST00000518877 ARFIP1P53367 373 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 RPS23P62266 143 aaKnown RBP0.8□□□□□ -2.28
PCM1-208ENST00000518877 DEFB134Q4QY38 66 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 KLHL12Q53G59 568 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 TGIF2LXQ8IUE1 241 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 BHLHE23Q8NDY6 225 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 OR4M1Q8NGD0 313 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 MARVELD1Q9BSK0 173 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 ETNK2Q9NVF9 386 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 SLC17A7Q9P2U7 560 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 SUN2Q9UH99 717 aa0.8□□□□□ -2.28
PCM1-208ENST00000518877 RPRD2Q5VT52 1461 aaKnown RBP0.8□□□□□ -2.28
PCM1-208ENST00000518877 PRRC2BQ5JSZ5 2229 aaKnown RBP0.79□□□□□ -2.28
PCM1-208ENST00000518877 TRAV6A0A075B6T7 132 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 CLRN2A0PK11 232 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 MFNGO00587 321 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 DYNC1I1O14576 645 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 NMT2O60551 498 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 KLHL41O60662 606 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 PALMO75781 387 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 SEMA3DO95025 777 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 ANXA5P08758 320 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 DESP17661 470 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 U2AF2P26368 475 aaKnown RBP eCLIP0.79□□□□□ -2.283e-8■■■□□ 14.7
PCM1-208ENST00000518877 CD70P32970 193 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 IDH2P48735 452 aaKnown RBP0.79□□□□□ -2.28
PCM1-208ENST00000518877 CEBPDP49716 269 aaPredicted RBP0.79□□□□□ -2.28
PCM1-208ENST00000518877 HNMTP50135 292 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 NDUFA8P51970 172 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 BST2Q10589 180 aaKnown RBP0.79□□□□□ -2.28
PCM1-208ENST00000518877 DGCR6Q14129 220 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 ZNF266Q14584 549 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 IHHQ14623 411 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 NCF4Q15080 339 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 CHRNA6Q15825 494 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 MED27Q6P2C8 311 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 DEGS2Q6QHC5 323 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 CCDC73Q6ZRK6 1079 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 CBLN2Q8IUK8 224 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 SGPP2Q8IWX5 399 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 OR52E2Q8NGJ4 325 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 NUBPLQ8TB37 319 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 GHSRQ92847 366 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 DCPSQ96C86 337 aaKnown RBP0.79□□□□□ -2.28
PCM1-208ENST00000518877 RNF145Q96MT1 663 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 SEC22CQ9BRL7 303 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 ZNF442Q9H7R0 627 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 IKZF2Q9UKS7 526 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 BLOC1S6Q9UL45 172 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 STARD10Q9Y365 291 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 PCDH11XQ9BZA7 1347 aa0.79□□□□□ -2.28
PCM1-208ENST00000518877 KIAA1671Q9BY89 1806 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 IGHV1-69DA0A0B4J2H0 117 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 SDHAF1A6NFY7 115 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 C4orf51C9J302 202 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 SMKR1H3BMG3 65 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 FKBP6O75344 327 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 PAHP00439 452 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 PFN1P07737 140 aaKnown RBP0.78□□□□□ -2.28
PCM1-208ENST00000518877 PSMB5P28074 263 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 TGFBR2P37173 567 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 TAGLN2P37802 199 aaKnown RBP0.78□□□□□ -2.28
PCM1-208ENST00000518877 GBX2P52951 348 aaPredicted RBP0.78□□□□□ -2.28
PCM1-208ENST00000518877 MAD2L1BPQ15013 274 aaPredicted RBP0.78□□□□□ -2.28
PCM1-208ENST00000518877 LUZP6Q538Z0 58 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 C12orf54Q6X4T0 127 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 ZCCHC7Q8N3Z6 543 aaKnown RBP0.78□□□□□ -2.28
PCM1-208ENST00000518877 EIF1ADQ8N9N8 165 aaKnown RBP0.78□□□□□ -2.28
PCM1-208ENST00000518877 CHST4Q8NCG5 386 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 OR1J4Q8NGS1 313 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 N4BP2L2Q92802 583 aaPredicted RBP0.78□□□□□ -2.28
PCM1-208ENST00000518877 EEF1AKMT3Q96AZ1 226 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 CCDC126Q96EE4 140 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 ZBED3Q96IU2 234 aaPredicted RBP0.78□□□□□ -2.28
PCM1-208ENST00000518877 PKMYT1Q99640 499 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 TMEM243Q9BU79 118 aa0.78□□□□□ -2.28
PCM1-208ENST00000518877 CHCHD7Q9BUK0 85 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms