RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MTPNP58546 118 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GNG2P59768 71 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 COPZ1P61923 177 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 LSM3P62310 102 aaKnown RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 RAC1P63000 192 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 CTAG1AP78358 180 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 LCN2P80188 198 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 IL1RL1Q01638 556 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 MVKQ03426 396 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 EPS8Q12929 822 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SKP2Q13309 424 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 IKZF1Q13422 519 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 CBFBQ13951 182 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 HABP2Q14520 560 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 MAD2L1BPQ15013 274 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 TBCEQ15813 527 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF79Q15937 498 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 NNATQ16517 81 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SYPL1Q16563 259 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SMN1Q16637 294 aaKnown RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF404Q494X3 552 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GPAT3Q53EU6 434 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 CEP78Q5JTW2 689 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 COX20Q5RI15 118 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 PDSS1Q5T2R2 415 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GCNT6Q5T4J0 391 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 PRAMEF20Q5VT98 475 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 RSBN1Q5VWQ0 802 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 KDM4DQ6B0I6 523 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 LAMTOR1Q6IAA8 161 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GLYATQ6IB77 296 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 FAHD1Q6P587 224 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 TNFAIP8L2Q6P589 184 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 C5orf46Q6UWT4 87 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ANGPTL8Q6UXH0 198 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 APOOLQ6UXV4 268 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 BRD3OSQ6XYD6 125 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ESPNLQ6ZVH7 1005 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 RFPL4BQ6ZWI9 263 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SZRD1Q7Z422 152 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ADCK1Q86TW2 530 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 MARCH3Q86UD3 253 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 CYP4Z1Q86W10 505 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 IFNEQ86WN2 208 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 IQCF2Q8IXL9 164 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 PRR22Q8IZ63 422 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF101Q8IZC7 436 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 PARP16Q8N5Y8 322 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 LSMEM1Q8N8F7 131 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 POC5Q8NA72 575 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 OR4K17Q8NGC6 315 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 OR5D16Q8NGK9 328 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 OR6S1Q8NH40 331 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 OR5AK3PQ8NH89 298 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 OR14L1PQ8NHC6 308 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GPR119Q8TDV5 335 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 DOK4Q8TEW6 326 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC25A43Q8WUT9 341 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC7A6Q92536 515 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 FIG4Q92562 907 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 RORBQ92753 470 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC38A4Q969I6 547 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 YIPF5Q969M3 257 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 TMEM19Q96HH6 336 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 FAM71F1Q96KD3 344 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 RNF145Q96MT1 663 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 NEDD4LQ96PU5 975 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SEPHS2Q99611 448 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 USB1Q9BQ65 265 aaKnown RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 FAM110AQ9BQ89 295 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GABARAPL3Q9BY60 117 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 POTEKPQ9BYX7 375 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC38A1Q9H2H9 487 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 PIF1Q9H611 641 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SLA2Q9H6Q3 261 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 MAGIXQ9H6Y5 334 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GORASP2Q9H8Y8 452 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GALNT9Q9HCQ5 603 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 TIGARQ9NQ88 270 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 GLRX2Q9NS18 164 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 PLCXD1Q9NUJ7 323 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ACER3Q9NUN7 267 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 MED17Q9NVC6 651 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 WARS2Q9UGM6 360 aaKnown RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 KCNE5Q9UJ90 142 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF229Q9UJW7 825 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF221Q9UK13 617 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 MKLN1Q9UL63 735 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 NDRG4Q9ULP0 352 aaKnown RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ANGPT4Q9Y264 503 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 CARD8Q9Y2G2 431 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF256Q9Y2P7 627 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 TMA7Q9Y2S6 64 aaKnown RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SNX5Q9Y5X3 404 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 SPIN1Q9Y657 262 aaPredicted RBP2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 ATP23Q9Y6H3 246 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 KCNE3Q9Y6H6 103 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 HSPE1-MOB4S4R3N1 261 aa2.6□□□□□ -1.99
SCARNA13-201ENST00000516672 V9GYH0 126 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms