RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 ZNF791Q3KP31 576 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 ACSM3Q53FZ2 586 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 YIF1BQ5BJH7 314 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CXorf66Q5JRM2 361 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 CCNJQ5T5M9 372 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SLC22A10Q63ZE4 541 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SFXN4Q6P4A7 337 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PLBD1Q6P4A8 553 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 WDR73Q6P4I2 378 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 Q6ZSR6 202 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ZNF767PQ75MW2 155 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 HAPLN4Q86UW8 402 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 C17orf82Q86X59 251 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 OR4N5Q8IXE1 308 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 TMEM99Q8N816 258 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ZNF441Q8N8Z8 693 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 NPEPL1Q8NDH3 523 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 FAM71CQ8NEG0 241 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 BBS1Q8NFJ9 593 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 OR52R1Q8NGF1 315 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 LILRB4Q8NHJ6 448 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PFN4Q8NHR9 129 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CCL4L1Q8NHW4 92 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ZFAND1Q8TCF1 268 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CAPSLQ8WWF8 208 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SMPDL3BQ92485 455 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 RFT1Q96AA3 541 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SMIM19Q96E16 107 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SENP5Q96HI0 755 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 RADILQ96JH8 1075 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 HYLS1Q96M11 299 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 VSTM2LQ96N03 204 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 OR2M2Q96R28 347 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 TNFRSF13CQ96RJ3 184 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CCDC3Q9BQI4 270 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 TMED9Q9BVK6 235 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 NMNAT2Q9BZQ4 307 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SPRY4Q9C004 299 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 RANBP3Q9H6Z4 567 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 PLEKHA1Q9HB21 404 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SCPEP1Q9HB40 452 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 MCCC2Q9HCC0 563 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 MEPEQ9NQ76 525 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 PRTFDC1Q9NRG1 225 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ACOXLQ9NUZ1 547 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 STMN3Q9NZ72 180 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 FLRT3Q9NZU0 649 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 TEKT2Q9UIF3 430 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 MRTO4Q9UKD2 239 aaKnown RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 SPATA2Q9UM82 520 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PLCL2Q9UPR0 1127 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 NTNG1Q9Y2I2 539 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 AMDHD2Q9Y303 409 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ZNF337Q9Y3M9 751 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ADAM18Q9Y3Q7 739 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 LOXL2Q9Y4K0 774 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 NUBP2Q9Y5Y2 271 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CACNG2Q9Y698 323 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 GOLGA4Q13439 2230 aaKnown RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 CUL9Q8IWT3 2517 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 A0A1B0GVI7 797 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 A0A1W2PQD3 144 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 FAM183AA6NL82 134 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 LRRN3E7EW58 273 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 J3QLW9 94 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 TFECO14948 347 aaPredicted RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 FLRT2O43155 660 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 SSX4O60224 188 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 EIF4E2O60573 245 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 PRAF2O60831 178 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ZNF217O75362 1048 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 REM1O75628 298 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 STATHP02808 62 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 IFNA16P05015 189 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 IGHV4-34P06331 123 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CD14P08571 375 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 RAB40ALP0C0E4 278 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 GKN3PP0CG01 181 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CT45A8P0DMV1 189 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CT45A9P0DMV2 189 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CTSEP14091 401 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 IL9P15248 144 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 ZNF19P17023 458 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 GABRG2P18507 467 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 FUT1P19526 365 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 MAPK3P27361 379 aaPredicted RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 PPICP45877 212 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 GABRA4P48169 554 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 GDI2P50395 445 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 BLVRAP53004 296 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CAV3P56539 151 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 AP3S2P59780 193 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 CSTF1Q05048 431 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 ARL16Q0P5N6 197 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 STX4Q12846 297 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 FZD2Q14332 565 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 GPR176Q14439 515 aa3.3□□□□□ -1.88
CAST-242ENST00000515063 EXOSC7Q15024 291 aaKnown RBP3.3□□□□□ -1.88
CAST-242ENST00000515063 ELOCQ15369 112 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms