RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MRM2Q9UI43 246 aaKnown RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SLC9A8Q9Y2E8 581 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 ATG4BQ9Y4P1 393 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 HEATR5AQ86XA9 2040 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 FAM183AA6NL82 134 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ACOT7O00154 380 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CLDN4O14493 209 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CTSVO60911 334 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CBR3O75828 277 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 KRT33AO76009 404 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 AIFM1O95831 613 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 SERPINA3P01011 423 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CCL4P13236 92 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 PRF1P14222 555 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 EFNB2P52799 333 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ACTA2P62736 377 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ACTG2P63267 376 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 IGLV3-21P80748 117 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 TSTA3Q13630 321 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 INPP5JQ15735 1006 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 PAN3Q58A45 887 aaKnown RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ARHGAP40Q5TG30 622 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF57Q68EA5 555 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ELP5Q8TE02 316 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 MITD1Q8WV92 249 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 OIT3Q8WWZ8 545 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 MR1Q95460 341 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 RRNAD1Q96FB5 475 aaKnown RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 OR14A2Q96R54 314 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ACTRT3Q9BYD9 372 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 FAM60AQ9NP50 221 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 SLC7A7Q9UM01 511 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 TRAV8-7A0A075B6U6 113 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 hCG_1809904A0A1W2PP81 198 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 A0A1W2PPE2 198 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 GNG14A0A1W2PPG7 69 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 A0A1W2PR64 198 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 A4D1N5 150 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 GPR31O00270 319 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 IMPA2O14732 288 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 MSTNO14793 375 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF264O43296 627 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CREBL2O60519 120 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 NDUFS6O75380 124 aaKnown RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CRTAPO75718 401 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CSTBP04080 98 aaKnown RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 SPP1P10451 314 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 SLC2A1P11166 492 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 POU1F1P28069 291 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 PSMB5P28074 263 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 KIR3DL2P43630 455 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 NPBWR1P48145 328 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ART1P52961 327 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 TMEM244Q5VVB8 128 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 IL22RA1Q8N6P7 574 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 RCBTB1Q8NDN9 531 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 GPR148Q8TDV2 347 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 SEH1LQ96EE3 360 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 C1orf147Q96MC9 270 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 BBS4Q96RK4 519 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF251Q9BRH9 671 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 SPXQ9BT56 116 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 BCL2L14Q9BZR8 327 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 DNAJB12Q9NXW2 375 aaKnown RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CABIN1Q9Y6J0 2220 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 LOC102723996A0A087X1L8 192 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 GGT3PA6NGU5 568 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 FIGNL2A6NMB9 653 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 H0YIZ8 118 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 PEX12O00623 359 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 OR2T1O43869 369 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 IGHMP01871 453 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 APOC1P02654 83 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF35P13682 527 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 PVRP15151 417 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 BUD31P41223 144 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 STARP49675 285 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 CASP6P55212 293 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 PPP1CAP62136 330 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF141Q15928 474 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 C1orf100Q5SVJ3 147 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 SHISA5Q8N114 240 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 OR51G2Q8NGK0 314 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 NOX4Q9NPH5 578 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 MRTO4Q9UKD2 239 aaKnown RBP6.6□□□□□ -1.35
CLIP1-205ENST00000514271 RP1P56715 2156 aa6.6□□□□□ -1.35
CLIP1-205ENST00000514271 K7ENP7 123 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 TSPAN4O14817 238 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 PRKRAO75569 313 aaKnown RBP6.59□□□□□ -1.35
CLIP1-205ENST00000514271 AKR7A3O95154 331 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 PMS2P2O95744 297 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 CASRP41180 1078 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 KCNAB1Q14722 419 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 EXT1Q16394 746 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 INO80CQ6PI98 192 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-205ENST00000514271 IL34Q6ZMJ4 242 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 ACOT4Q8N9L9 421 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 CT55Q8WUE5 264 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 ABHD17AQ96GS6 310 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms