RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 CBY3A6NI87 242 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 CGB1A6NKQ9 187 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 LRRN3E7EW58 273 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 G3V2L1 256 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 TNFRSF13BO14836 293 aaPredicted RBP3.92□□□□□ -1.78
HTT-211ENST00000513326 LSM1O15116 133 aaKnown RBP3.92□□□□□ -1.78
HTT-211ENST00000513326 LDLRAD4O15165 306 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 CFLARO15519 480 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 FCN3O75636 299 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 TSPAN9O75954 239 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 MFN2O95140 757 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 IGHV3-13P01766 116 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SERPINA5P05154 406 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 KRT16P08779 473 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 PPIAL4GP0DN37 164 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 MMP9P14780 707 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 ZNF43P17038 809 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 PAX7P23759 505 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 CXCR1P25024 350 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 GRPRP30550 384 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 TNFSF8P32971 234 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 ARL3P36405 182 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 RPL4P36578 427 aaKnown RBP3.92□□□□□ -1.78
HTT-211ENST00000513326 CFHR2P36980 270 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 HPCAL1P37235 193 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 ERFP50548 548 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 CLNS1AP54105 237 aaKnown RBP3.92□□□□□ -1.78
HTT-211ENST00000513326 UCP2P55851 309 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 GNB2P62879 340 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 HOXC5Q00444 222 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 PMS2P3Q13401 168 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 CAMK2DQ13557 499 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 HERPUD1Q15011 391 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SYPL1Q16563 259 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SRSF7Q16629 238 aaKnown RBP eCLIP3.92□□□□□ -1.78
HTT-211ENST00000513326 GSTA3Q16772 222 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 MMEL1Q495T6 779 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 TMEM155Q4W5P6 130 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 ESCO2Q56NI9 601 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 DEFB121Q5J5C9 76 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 MORN5Q5VZ52 161 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SLC35E4Q6ICL7 350 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SLC2A7Q6PXP3 512 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 LYPD2Q6UXB3 125 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 ZNF836Q6ZNA1 936 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 Q6ZR03 302 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 KRT77Q7Z794 578 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 PXKQ7Z7A4 578 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 COMTD1Q86VU5 262 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 ANKRD46Q86W74 232 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 VRK2Q86Y07 508 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SPICQ8N5J4 248 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 TMEM86BQ8N661 226 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 ZNF283Q8N7M2 679 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 C19orf18Q8NEA5 215 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 MPLKIPQ8TAP9 179 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 ZNF519Q8TB69 540 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SLC25A40Q8TBP6 338 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 NTN5Q8WTR8 489 aaPredicted RBP3.92□□□□□ -1.78
HTT-211ENST00000513326 SSMEM1Q8WWF3 244 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 COQ8BQ96D53 544 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 RHOXF2Q9BQY4 288 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 NUDT16L1Q9BRJ7 211 aaKnown RBP3.92□□□□□ -1.78
HTT-211ENST00000513326 PCGF1Q9BSM1 259 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 TAPBPLQ9BX59 468 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SLC38A1Q9H2H9 487 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 TCF7L2Q9NQB0 619 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 RRAGDQ9NQL2 400 aaPredicted RBP3.92□□□□□ -1.78
HTT-211ENST00000513326 SLCO1C1Q9NYB5 712 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 SLC17A7Q9P2U7 560 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 POMT1Q9Y6A1 747 aa3.92□□□□□ -1.78
HTT-211ENST00000513326 DNAH7Q8WXX0 4024 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 GAGE12JA6NER3 117 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 A8MVM7 634 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 MS4A18H0YCH9 400 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 HMGN4O00479 90 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 FAAHO00519 579 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 HSPB6O14558 160 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 SLC25A17O43808 307 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 CRCPO75575 148 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 SERPINI2O75830 405 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 UBL3O95164 117 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 VAMP5O95183 116 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 AHSA1O95433 338 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 CYB5R3P00387 301 aaPredicted RBP3.91□□□□□ -1.78
HTT-211ENST00000513326 CD55P08174 381 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 SPARCP09486 303 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 TFPTP0C1Z6 253 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 CD28P10747 220 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 RPS2P15880 293 aaKnown RBP3.91□□□□□ -1.78
HTT-211ENST00000513326 RPS4Y1P22090 263 aaKnown RBP3.91□□□□□ -1.78
HTT-211ENST00000513326 PAX6P26367 422 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 FKBP2P26885 142 aaKnown RBP3.91□□□□□ -1.78
HTT-211ENST00000513326 GCAP28676 217 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 HOXD3P31249 432 aaPredicted RBP3.91□□□□□ -1.78
HTT-211ENST00000513326 EFNB2P52799 333 aa3.91□□□□□ -1.78
HTT-211ENST00000513326 NANOS3P60323 173 aaKnown RBP3.91□□□□□ -1.78
HTT-211ENST00000513326 TNFAIP6P98066 277 aaPredicted RBP3.91□□□□□ -1.78
HTT-211ENST00000513326 CALCOCO2Q13137 446 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms