RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ARFGEF3Q5TH69 2177 aa5.54□□□□□ -1.52
KDM3B-208ENST00000512928 CSPG4Q6UVK1 2322 aa5.54□□□□□ -1.52
KDM3B-208ENST00000512928 SVEP1Q4LDE5 3571 aa5.54□□□□□ -1.52
KDM3B-208ENST00000512928 SONP18583 2426 aaKnown RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 IGHV3-64DA0A0J9YX35 117 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 RIIAD1A6NNX1 92 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 B4DSR2 109 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 H3BSA7 217 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 BHLHE40O14503 412 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 RP2O75695 350 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 CIB2O75838 187 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 IFNGP01579 166 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 TFP02787 698 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 LCATP04180 440 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 GYPBP06028 91 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 FCGR1AP12314 374 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 ZNF3P17036 446 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 LIPAP38571 399 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 RPS27P42677 84 aaKnown RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 CRYBB2P43320 205 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 RGS6P49758 472 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 MMP15P51511 669 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 PRSS12P56730 875 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 MRPS11P82912 194 aaKnown RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 MALLQ13021 153 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 PSG7Q13046 419 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 HNRNPA0Q13151 305 aaKnown RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 CRMP1Q14194 572 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 TAF13Q15543 124 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 KCNMB1Q16558 191 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 CR1LQ2VPA4 569 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 TMEM255AQ5JRV8 349 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 FAM209AQ5JX71 171 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OR2T2Q6IF00 324 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 SLC18B1Q6NT16 456 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 SHQ1Q6PI26 577 aaKnown RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 CFAP77Q6ZQR2 320 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 RASSF6Q6ZTQ3 369 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 SPATC1Q76KD6 591 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 PEG10Q86TG7 708 aaKnown RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 GLCCI1Q86VQ1 547 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 PHC2Q8IXK0 858 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 PARP8Q8N3A8 854 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 IQCF1Q8N6M8 205 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 SLC37A3Q8NCC5 494 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OR2T33Q8NG76 320 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OR10AD1Q8NGE0 317 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OR5L1Q8NGL2 311 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OR8D4Q8NGM9 314 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OR2T4Q8NH00 348 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OR4Q3Q8NH05 313 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OR51F2Q8NH61 342 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 GIPC3Q8TF64 312 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 RAB1CQ92928 201 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 SPTSSAQ969W0 71 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 APOBEC3DQ96AK3 386 aaPredicted RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 DIRC2Q96SL1 478 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 COQ7Q99807 217 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 ATF6BQ99941 703 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 OSBPL10Q9BXB5 764 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 YY1AP1Q9H869 796 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 ZNF556Q9HAH1 456 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 TBCCD1Q9NVR7 557 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 NKIRAS2Q9NYR9 191 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 IL20Q9NYY1 176 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 PDP1Q9P0J1 537 aaPredicted RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 KIF17Q9P2E2 1029 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 CGGBP1Q9UFW8 167 aaPredicted RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 TMEFF2Q9UIK5 374 aaPredicted RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 KLHL21Q9UJP4 597 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 PURGQ9UJV8 347 aaKnown RBP5.53□□□□□ -1.52
KDM3B-208ENST00000512928 ZDHHC8Q9ULC8 765 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 WIPI2Q9Y4P8 454 aa5.53□□□□□ -1.52
KDM3B-208ENST00000512928 MXRA5Q9NR99 2828 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 FAM183AA6NL82 134 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 RNF212BA8MTL3 300 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 FAM157AC9JC47 383 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 CASQ2O14958 399 aaPredicted RBP5.52□□□□□ -1.53
KDM3B-208ENST00000512928 SURF4O15260 269 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 ICMTO60725 284 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 DEAF1O75398 565 aaPredicted RBP5.52□□□□□ -1.53
KDM3B-208ENST00000512928 TIPRLO75663 272 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 MSMBP08118 114 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 SBK2P0C263 348 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 CLUP10909 449 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 TNFRSF1AP19438 455 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 PCMT1P22061 227 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 TUBG1P23258 451 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 FMO3P31513 532 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 RBMXP38159 391 aaKnown RBP5.52□□□□□ -1.53
KDM3B-208ENST00000512928 TPTEP56180 551 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 SLC3A1Q07837 685 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 COX10Q12887 443 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 ECH1Q13011 328 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 SPRNQ5BIV9 151 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 KDM4DQ6B0I6 523 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 FAHD2BQ6P2I3 314 aaPredicted RBP5.52□□□□□ -1.53
KDM3B-208ENST00000512928 LYPD4Q6UWN0 246 aa5.52□□□□□ -1.53
KDM3B-208ENST00000512928 MRPL21Q7Z2W9 205 aaKnown RBP5.52□□□□□ -1.53
KDM3B-208ENST00000512928 DCXRQ7Z4W1 244 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms