RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 DOHHQ9BU89 302 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 METTL7AQ9H8H3 244 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 APMAPQ9HDC9 416 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 KCNJ16Q9NPI9 418 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 MBNL1Q9NR56 388 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 RAI2Q9Y5P3 530 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TRPM7Q96QT4 1865 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TRAV1-2A0A0B4J238 106 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 NKX2-6A6NCS4 301 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 GLB1P16278 677 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 DRD1P21728 446 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 CBFBQ13951 182 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 DOK6Q6PKX4 331 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 FRRS1Q6ZNA5 592 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 Q6ZSR9 355 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TTLL10Q6ZVT0 673 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 DEFB132Q7Z7B7 95 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 PTGR2Q8N8N7 351 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 AMER3Q8N944 861 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 OR4K17Q8NGC6 315 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 OR52L1Q8NGH7 329 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 OR52B4Q8NGK2 314 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 OR13C5Q8NGS8 318 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 FCAMRQ8WWV6 532 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 GTPBP3Q969Y2 492 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 ANKRD9Q96BM1 317 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 CIB3Q96Q77 187 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 NKX3-1Q99801 234 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TMEM38BQ9NVV0 291 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 RLIMQ9NVW2 624 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 PLEKHJ1Q9NW61 149 aa9.73□□□□□ -0.85
PDLIM5-210ENST00000508216 TRIP11Q15643 1979 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 KLK8O60259 260 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 YPEL1O60688 119 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 TIAF1O95411 115 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 SMIM17P0DL12 118 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF19P17023 458 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 EDNRBP24530 442 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 IL12BP29460 328 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 CEACAM3P40198 252 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 SLC6A8P48029 635 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 SLC6A11P48066 632 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 PTH2RP49190 550 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 RAB9AP51151 201 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 SSBP1Q04837 148 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 ATXN7L2Q5T6C5 722 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 RD3Q7Z3Z2 195 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 CALHM1Q8IU99 346 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 TGIF2LYQ8IUE0 185 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 FAM58AQ8N1B3 248 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 GPD1LQ8N335 351 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 SLC26A10Q8NG04 563 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 SNX22Q96L94 193 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 ZFP3Q96NJ6 502 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 GUCD1Q96NT3 240 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 YPEL2Q96QA6 119 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 NELFAQ9H3P2 528 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 FZD8Q9H461 694 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 AUNIPQ9H7T9 357 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 SRD5A3Q9H8P0 318 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 DNAJC27Q9NZQ0 273 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 COPS7AQ9UBW8 275 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 CLN8Q9UBY8 286 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 TBX21Q9UL17 535 aa9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 C14orf166Q9Y224 244 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 MRPS16Q9Y3D3 137 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 TDRD15B5MCY1 1934 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-210ENST00000508216 MYO18AQ92614 2054 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 GXYLT2A0PJZ3 443 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 TLCD2A6NGC4 264 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 AQP7P3A6NL99 342 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 PRR33A8MZF0 331 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF814B7Z6K7 855 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 OR7C2O60412 319 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 GPR32O75388 356 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 LRATO95237 230 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 DUS4LO95620 317 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 SAT1P21673 171 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 GDF1P27539 372 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 NMBRP28336 390 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 BLKP51451 505 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 ATP5IP56385 69 aaPredicted RBP9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 JAG1P78504 1218 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 PTSQ03393 145 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 TMEM176BQ3YBM2 270 aaPredicted RBP9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF789Q5FWF6 425 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF667Q5HYK9 610 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 RPL22L1Q6P5R6 122 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 GLT6D1Q7Z4J2 308 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 NIT1Q86X76 327 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 OR10H4Q8NGA5 316 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF417Q8TAU3 575 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 LINC01599Q8WXQ3 324 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 SPSB4Q96A44 273 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 ATOH8Q96SQ7 321 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 LAMTOR2Q9Y2Q5 125 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 RNF115Q9Y4L5 304 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 STYXL1Q9Y6J8 313 aa9.71□□□□□ -0.85
PDLIM5-210ENST00000508216 TSC2P49815 1807 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms