RNA–Protein interactions for RNA: ENST00000507836.1

CAST-219, Transcript of calpastatin, human

TSL 3

Gene CAST, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-219	ENST00000507836	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	0.93	□□□□□ -2.26
CAST-219	ENST00000507836	CENPVL3	A0A0U1RRI6	287 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	TMEM120B	A0PK00	339 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	HEATR9	A2RTY3	570 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	XKRY2	A2RUG3	117 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	ZNF98	A6NK75	572 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	OR5H1	A6NKK0	313 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	NCBP2L	A6PVI3	153 aa	Known RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	LYRM9	A8MSI8	78 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	CEACAM18	A8MTB9	384 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	KRBOX1	C9JBD0	128 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	DNASE2	O00115	360 aa	Predicted RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SOCS1	O15524	211 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	EIF4E2	O60573	245 aa	Known RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SERPINB7	O75635	380 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	FLOT1	O75955	427 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	NDUFB10	O96000	172 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	CSNK2A2	P19784	350 aa	Predicted RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	EIF2S2	P20042	333 aa	Known RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	IL32	P24001	234 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	CD34	P28906	385 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	TALDO1	P37837	337 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	RBM34	P42696	430 aa	Known RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SLC1A1	P43005	524 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	CRISP1	P54107	249 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SP4	Q02446	784 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	FUT5	Q11128	374 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SELENBP1	Q13228	472 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	NCF4	Q15080	339 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SSX2	Q16385	188 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	HSP90AB3P	Q58FF7	597 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	RNASE13	Q5GAN3	156 aa	Known RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	AVPI1	Q5T686	147 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	C9orf135	Q5VTT2	229 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	ADNP2	Q6IQ32	1131 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	REEP3	Q6NUK4	255 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	BHLHA15	Q7RTS1	189 aa	Predicted RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SLC16A14	Q7RTX9	510 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	ARL6IP6	Q8N6S5	226 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	OR5T1	Q8NG75	326 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	OR56B2P	Q8NGI1	322 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	OR52E2	Q8NGJ4	325 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	OR5M1	Q8NGP8	315 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	DCPS	Q96C86	337 aa	Known RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SEH1L	Q96EE3	360 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	WDR34	Q96EX3	536 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	DYNLL2	Q96FJ2	89 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	GALNT14	Q96FL9	552 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	RHOXF2	Q9BQY4	288 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	SHANK2-AS3	Q9BTD1	123 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	RSG1	Q9BU20	258 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	MYOZ1	Q9NP98	299 aa	Predicted RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	ZNF586	Q9NXT0	402 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	LGALS13	Q9UHV8	139 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	ZNF230	Q9UIE0	474 aa	Predicted RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	VANGL2	Q9ULK5	521 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	CBY1	Q9Y3M2	126 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	UBIAD1	Q9Y5Z9	338 aa		0.92	□□□□□ -2.26
CAST-219	ENST00000507836	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	0.92	□□□□□ -2.26
CAST-219	ENST00000507836	MYO16	Q9Y6X6	1858 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	IGHV3-49	A0A0A0MS15	119 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	IGHV1-69D	A0A0B4J2H0	117 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	IGKV2-24	A0A0C4DH68	120 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	OR2AG2	A6NM03	316 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836		K7EMT4	169 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	SLC9A3R1	O14745	358 aa	Predicted RBP	0.91	□□□□□ -2.26
CAST-219	ENST00000507836	RAD51C	O43502	376 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	NMT2	O60551	498 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	EIF1B	O60739	113 aa	Known RBP	0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CLDN11	O75508	207 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CIB2	O75838	187 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	SEMA3D	O95025	777 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CYB5R3	P00387	301 aa	Predicted RBP	0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CD74	P04233	296 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CTSL	P07711	333 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	TROVE2	P10155	538 aa	Known RBP eCLIP	0.91	□□□□□ -2.26
CAST-219	ENST00000507836	OR1E1	P30953	314 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	FOXN2	P32314	431 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	EIF1	P41567	113 aa	Known RBP	0.91	□□□□□ -2.26
CAST-219	ENST00000507836	PRLHR	P49683	370 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	NDUFA8	P51970	172 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CDH6	P55285	790 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	SYNJ2BP	P57105	145 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CCNA1	P78396	465 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	HMGN5	P82970	282 aa	Known RBP	0.91	□□□□□ -2.26
CAST-219	ENST00000507836	ART3	Q13508	389 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CHRNA6	Q15825	494 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	ALKBH6	Q3KRA9	238 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	KLHL12	Q53G59	568 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	YIF1B	Q5BJH7	314 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	XKR7	Q5GH72	579 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	STUM	Q69YW2	141 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CMC1	Q7Z7K0	106 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	CDR2L	Q86X02	465 aa	Predicted RBP	0.91	□□□□□ -2.26
CAST-219	ENST00000507836	NPW	Q8N729	165 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	C11orf72	Q8NBR9	251 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	OR4A4P	Q8NGN8	299 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	OR1J4	Q8NGS1	313 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	LYPD6B	Q8NI32	183 aa		0.91	□□□□□ -2.26
CAST-219	ENST00000507836	SLC2A14	Q8TDB8	520 aa		0.91	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms