RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 MT-ND5P03915 603 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 ACSM4P0C7M7 580 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 SLC2A1P11166 492 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 ATP6V1B1P15313 513 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 PAX7P23759 505 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 HSD11B1P28845 292 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 APLNRP35414 380 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 CX3CR1P49238 355 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 GDI2P50395 445 aaKnown RBP12.29□□□□□ -0.44
RNF4-208ENST00000507247 C3orf36Q3SXR2 165 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 XAF1Q6GPH4 301 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 TMPRSS11AQ6ZMR5 421 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 KCTD20Q7Z5Y7 419 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 KLBQ86Z14 1044 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 ZNF283Q8N7M2 679 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 RORBQ92753 470 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 ZNF799Q96GE5 643 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 NIPAL2Q9H841 368 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 KLF2Q9Y5W3 355 aaPredicted RBP12.29□□□□□ -0.44
RNF4-208ENST00000507247 C5orf63A6NC05 138 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 SIAH2O43255 324 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 CLDN1O95832 211 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 CCNOP22674 350 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 CALCRP30988 508 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 DCTDP32321 178 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 WNT5AP41221 380 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 GTF2A1P52655 376 aaPredicted RBP12.28□□□□□ -0.44
RNF4-208ENST00000507247 ZNF121P58317 390 aaPredicted RBP12.28□□□□□ -0.44
RNF4-208ENST00000507247 PSMA6P60900 246 aaKnown RBP12.28□□□□□ -0.44
RNF4-208ENST00000507247 NAAAQ02083 359 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 SPOCK1Q08629 439 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 SPHARQ15513 63 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 MED22Q15528 200 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 TBC1D28Q2M2D7 210 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 KCTD8Q6ZWB6 473 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 SSX8Q7RTT4 187 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 PRSS45Q7RTY3 260 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 DMRTC2Q8IXT2 367 aaPredicted RBP12.28□□□□□ -0.44
RNF4-208ENST00000507247 ACBD4Q8NC06 268 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 SPTSSAQ969W0 71 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 DOK1Q99704 481 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 MOV10Q9HCE1 1003 aaKnown RBP12.28□□□□□ -0.44
RNF4-208ENST00000507247 BRD7Q9NPI1 651 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 FAM206AQ9NX38 181 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 CRIM1Q9NZV1 1036 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 SIRT4Q9Y6E7 314 aaPredicted RBP12.28□□□□□ -0.44
RNF4-208ENST00000507247 R4GMQ9 66 aa12.28□□□□□ -0.44
RNF4-208ENST00000507247 SPTBN1Q01082 2364 aaKnown RBP12.28□□□□□ -0.44
RNF4-208ENST00000507247 IGHV2OR16-5A0A0B4J2B6 119 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 TMEM269A0A1B0GVZ9 245 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 DPRXA6NFQ7 191 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 PRSS44E7EML9 344 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 TACSTD2P09758 323 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 ZNF35P13682 527 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 CD40P25942 277 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 SLC6A9P48067 706 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 TPTEP56180 551 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 NANOS3P60323 173 aaKnown RBP12.27□□□□□ -0.45
RNF4-208ENST00000507247 NEDD8Q15843 81 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 ZNF829Q3KNS6 432 aaPredicted RBP12.27□□□□□ -0.45
RNF4-208ENST00000507247 UBE2UQ5VVX9 321 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 DRAM2Q6UX65 266 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 CATSPERDQ86XM0 798 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 EGFL6Q8IUX8 553 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 ZFP41Q8N8Y5 198 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 IL17RDQ8NFM7 739 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 PPP1R14AQ96A00 147 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 DACH2Q96NX9 599 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 MYCBPQ99417 103 aaPredicted RBP12.27□□□□□ -0.45
RNF4-208ENST00000507247 MRPS26Q9BYN8 205 aaKnown RBP12.27□□□□□ -0.45
RNF4-208ENST00000507247 CDH20Q9HBT6 801 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 G6PC2Q9NQR9 355 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 BABAM2Q9NXR7 383 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 ZNF319Q9P2F9 582 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 ST6GALNAC2Q9UJ37 374 aa12.27□□□□□ -0.45
RNF4-208ENST00000507247 PTPN13Q12923 2485 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 LOC110117498-PIK3R3F6TDL0 507 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 INMTO95050 263 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 ANXA2P07355 339 aaKnown RBP12.26□□□□□ -0.45
RNF4-208ENST00000507247 EPXP11678 715 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 KIR2DL3P43628 341 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 KIR3DL2P43630 455 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 MMP16P51512 607 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 GBX2P52951 348 aaPredicted RBP12.26□□□□□ -0.45
RNF4-208ENST00000507247 BSPH1Q075Z2 132 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 ACSM1Q08AH1 577 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 SNAI3Q3KNW1 292 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 WDR38Q5JTN6 314 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 FDX2Q6P4F2 183 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 FAM57BQ71RH2 274 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 ZNF367Q7RTV3 350 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 ZNF101Q8IZC7 436 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 PRSS35Q8N3Z0 413 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 OR8B12Q8NGG6 310 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 OR1J2Q8NGS2 313 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 OR2G2Q8NGZ5 317 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 RPS4Y2Q8TD47 263 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 MUL1Q969V5 352 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 C4orf45Q96LM5 186 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms