RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 DAOP14920 347 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 IGFBP5P24593 272 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 RGS6P49758 472 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 RPS7P62081 194 aaKnown RBP11.2□□□□□ -0.62
TCOF1-209ENST00000506630 ESRRGP62508 458 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 SNAPC1Q16533 368 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 MOGQ16653 247 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 KLHL12Q53G59 568 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 LINC01590Q5TEZ4 76 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 MBNL2Q5VZF2 373 aaKnown RBP11.2□□□□□ -0.62
TCOF1-209ENST00000506630 KDM4DQ6B0I6 523 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 DCXRQ7Z4W1 244 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 OR6N2Q8NGY6 317 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 C10orf105Q8TEF2 133 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 GTF3AQ92664 365 aaKnown RBP11.2□□□□□ -0.62
TCOF1-209ENST00000506630 ZMYND19Q96E35 227 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-209ENST00000506630 MAP6Q96JE9 813 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 COG8Q96MW5 612 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 INTS14Q96SY0 518 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 PKP2Q99959 881 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 PRRG3Q9BZD7 231 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 PNRC2Q9NPJ4 139 aaKnown RBP11.2□□□□□ -0.62
TCOF1-209ENST00000506630 HINT3Q9NQE9 182 aaKnown RBP11.2□□□□□ -0.62
TCOF1-209ENST00000506630 PTTG3PQ9NZH4 202 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 LPAR3Q9UBY5 353 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 ENOPH1Q9UHY7 261 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 PLSCR5A0PG75 271 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 C17orf100A8MU93 164 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 H3BNX3 289 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 ZNF593O00488 134 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-209ENST00000506630 TIMM8AO60220 97 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-209ENST00000506630 SLC25A16P16260 332 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 GSTT1P30711 240 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 ECH1Q13011 328 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 PTGES3Q15185 160 aaKnown RBP11.19□□□□□ -0.62
TCOF1-209ENST00000506630 TMEM255AQ5JRV8 349 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 CPOQ8IVL8 374 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 C10orf67Q8IYJ2 551 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 OR10S1Q8NGN2 331 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 UBASH3BQ8TF42 649 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 PTP4A1Q93096 173 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 SPTSSAQ969W0 71 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 APOBEC3DQ96AK3 386 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-209ENST00000506630 COPS4Q9BT78 406 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 C19orf24Q9BVV8 132 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 SHARPINQ9H0F6 387 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 TMEM160Q9NX00 188 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 STARD10Q9Y365 291 aa11.19□□□□□ -0.62
TCOF1-209ENST00000506630 A0A096LNT2 108 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 LOC390937A0A1W2PQ73 354 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 J3QW42 95 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 PRODHO43272 600 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 TPD52L2O43399 206 aaKnown RBP11.18□□□□□ -0.62
TCOF1-209ENST00000506630 NCR1O76036 304 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 HPXP02790 462 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 ACSM4P0C7M7 580 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 TUBG1P23258 451 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 THBS2P35442 1172 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 MAGEB1P43366 347 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 SLC6A9P48067 706 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 ZNF81P51508 661 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 TPTEP56180 551 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 EIF2B1Q14232 305 aaKnown RBP11.18□□□□□ -0.62
TCOF1-209ENST00000506630 TAF13Q15543 124 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 TMEM249Q2WGJ8 235 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 SPATC1Q76KD6 591 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 DPY19L4Q7Z388 723 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 BBS1Q8NFJ9 593 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 OR5L1Q8NGL2 311 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 CMBLQ96DG6 245 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 SLAMF6Q96DU3 332 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 CIB1Q99828 191 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 RBM4BQ9BQ04 359 aaKnown RBP11.18□□□□□ -0.62
TCOF1-209ENST00000506630 RIBC2Q9H4K1 309 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 TUBG2Q9NRH3 451 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 CENPMQ9NSP4 180 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 MALRD1Q5VYJ5 2156 aa11.18□□□□□ -0.62
TCOF1-209ENST00000506630 ZAR1LA6NP61 321 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 ZNF878C9JN71 531 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 LYNX1G3V0Z9 82 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 M0R129 80 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 M0R135 149 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 NDUFS8O00217 210 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 SPRY3O43610 288 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 SELENOFO60613 162 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 LCATP04180 440 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 LYNX1P0DP58 116 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 EPHA2P29317 976 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 NAA10P41227 235 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-209ENST00000506630 MMP15P51511 669 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 CCL8P80075 99 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 PSG7Q13046 419 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 APOFQ13790 326 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 GGTLC2Q14390 218 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 HLXQ14774 488 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-209ENST00000506630 TSTQ16762 297 aaKnown RBP11.17□□□□□ -0.62
TCOF1-209ENST00000506630 PCK2Q16822 640 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 RSPO1Q2MKA7 263 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-209ENST00000506630 PCGF3Q3KNV8 242 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 KRTAP27-1Q3LI81 207 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms