RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 NEUROG2Q9H2A3 272 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 DHX35Q9H5Z1 703 aaKnown RBP2.18□□□□□ -2.06
RFC1-209ENST00000504974 SLC25A22Q9H936 323 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 APMAPQ9HDC9 416 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 DYRK4Q9NR20 520 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 POLE4Q9NR33 117 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 ZNHIT6Q9NWK9 470 aaKnown RBP2.18□□□□□ -2.06
RFC1-209ENST00000504974 THUMPD1Q9NXG2 353 aaKnown RBP2.18□□□□□ -2.06
RFC1-209ENST00000504974 FBXL12Q9NXK8 326 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 UVRAGQ9P2Y5 699 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 MTRF1LQ9UGC7 380 aaKnown RBP2.18□□□□□ -2.06
RFC1-209ENST00000504974 KIF25Q9UIL4 384 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 HPCAL4Q9UM19 191 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 MYO7BQ6PIF6 2116 aa2.18□□□□□ -2.06
RFC1-209ENST00000504974 ZFC3H1O60293 1989 aaKnown RBP2.18□□□□□ -2.06
RFC1-209ENST00000504974 CELSR1Q9NYQ6 3014 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 NOTCH1P46531 2555 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 ADGRG4Q8IZF6 3080 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 LRP4O75096 1905 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 LRRK1Q38SD2 2015 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 COL6A5A8TX70 2615 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 PDZD2O15018 2839 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 APCP25054 2843 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 IGKV1D-8A0A087WSZ0 117 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 IGHV1OR21-1A0A087WYE8 117 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 A0A087X0T9 212 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 C15orf38-AP3S2A0A0A6YYH1 394 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 NSG1A0A0A6YYJ2 146 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 WI2-2373I1.2A0A1W2PRP0 233 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 TSPAN11A1L157 253 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 FAM47DPA6NHR8 397 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 C10orf142B7Z368 130 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 GFYI3L273 518 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 K7ERQ8 282 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 KPNA3O00505 521 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 YKT6O15498 198 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 KDELR3O43731 214 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 DFNA5O60443 496 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 LDOC1O95751 146 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 IGHV4-34P06331 123 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CTSLP07711 333 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 FAM228BP0C875 321 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 ADRB3P13945 408 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 NCK1P16333 377 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 MGMTP16455 207 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 MIPP30301 263 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 HSPA9P38646 679 aaKnown RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 MAP3K8P41279 467 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 SSR1P43307 286 aaKnown RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 VDAC2P45880 294 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 HCAR3P49019 387 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CCNHP51946 323 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 HNRNPA3P51991 378 aaKnown RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 CDH6P55285 790 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CLDN6P56747 220 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 C21orf59P57076 290 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 NUP107P57740 925 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 TAS2R19P59542 299 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 RHOAP61586 193 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 SPIBQ01892 262 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 SLC25A11Q02978 314 aaKnown RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 RAD51Q06609 339 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 GRB7Q14451 532 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 DPYSL2Q16555 572 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 HADHQ16836 314 aaKnown RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 BOLA3Q53S33 107 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CARD16Q5EG05 197 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CCDC122Q5T0U0 273 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 PDZK1Q5T2W1 519 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 PIP5KL1Q5T9C9 394 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 HES3Q5TGS1 186 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 TMIGD1Q6UXZ0 262 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 H2AFVQ71UI9 128 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 GDPD3Q7L5L3 318 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 UMODL1-AS1Q8N2C9 162 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 BBS5Q8N3I7 341 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 PNKDQ8N490 385 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 ATPAF2Q8N5M1 289 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 NPWQ8N729 165 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CCDC71LQ8N9Z2 235 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 OR8K1Q8NGG5 319 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 OR6K2Q8NGY2 324 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 OR9G1Q8NH87 305 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 BRSK1Q8TDC3 778 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 EFHD2Q96C19 240 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 CMTM7Q96FZ5 175 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CCDC42Q96M95 316 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 ZNF578Q96N58 590 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 CSPG4P5Q96PW8 444 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CCNL2Q96S94 520 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 MBOAT4Q96T53 435 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 HIST1H4GQ99525 98 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 NPAS2Q99743 824 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 RASL11BQ9BPW5 248 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 TM6SF2Q9BZW4 377 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 VCX2Q9H322 139 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 REEP4Q9H6H4 257 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 RNF167Q9H6Y7 350 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 LRRC19Q9H756 370 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms