RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TSEN15Q8WW01 171 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 S100ZQ8WXG8 99 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 ACOT12Q8WYK0 555 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 HSD17B8Q92506 261 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 KCTD12Q96CX2 325 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 C10orf35Q96D05 121 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 TRMT61AQ96FX7 289 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF799Q96GE5 643 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 DERL3Q96Q80 235 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SH3GL3Q99963 347 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 MRI1Q9BV20 369 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SLIRPQ9GZT3 109 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 NXF2Q9GZY0 626 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 OR10A2Q9H208 303 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 RGCCQ9H4X1 137 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 TCF7L1Q9HCS4 588 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SNTG1Q9NSN8 517 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 ASF1BQ9NVP2 202 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 CKLFQ9UBR5 152 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 PRSS50Q9UI38 385 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 DHDHQ9UQ10 334 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 SLC22A13Q9Y226 551 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 FAM215AQ9Y5M1 114 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 PEX16Q9Y5Y5 336 aa7.12□□□□□ -1.27
TOPBP1-202ENST00000503338 FREM2Q5SZK8 3169 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 CEP295Q9C0D2 2601 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 TRBV5-7A0A0A0MS05 114 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 CIB4A0PJX0 185 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 MEGF11A6BM72 1044 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 DHRS7CA6NNS2 312 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 F5H5K5 113 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 J3QW42 95 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 MSTNO14793 375 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 SYT7O43581 403 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 TNFSF13O75888 250 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 WNT11O96014 354 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 CGAP01215 116 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 ANXA2P07355 339 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 CD79AP11912 226 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 SRMP19623 302 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 FSTP19883 344 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 RAB3BP20337 219 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 CCL1P22362 96 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 CRYGSP22914 178 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 HTR5AP47898 357 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 SLC6A9P48067 706 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 PRKXP51817 358 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF121P58317 390 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 PSG4Q00888 419 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 GALK2Q01415 458 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 MFGE8Q08431 387 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 MRPL49Q13405 166 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 MOGQ16653 247 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 GSG1Q2KHT4 349 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 KRTAP27-1Q3LI81 207 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 RTL6Q6ICC9 239 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 MZT2AQ6P582 158 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 SEM1Q6ZVN7 128 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 DOK3Q7L591 496 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 DOLPP1Q86YN1 238 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF433Q8N7K0 673 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 OR1J2Q8NGS2 313 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 ASB5Q8WWX0 329 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 BCL2L2Q92843 193 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 TMEM106AQ96A25 262 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 STARD4Q96DR4 205 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 PGAM5Q96HS1 289 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 OR14A2Q96R54 314 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 WNT5BQ9H1J7 359 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 OPA3Q9H6K4 179 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 RNF167Q9H6Y7 350 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 SLC24A3Q9HC58 644 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 NOX4Q9NPH5 578 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 SLC17A5Q9NRA2 495 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF629Q9UEG4 869 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 ADAM30Q9UKF2 790 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 FOXJ3Q9UPW0 622 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 BOLA1Q9Y3E2 137 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 CACNA1AO00555 2505 aa7.11□□□□□ -1.27
TOPBP1-202ENST00000503338 GTF3C1Q12789 2109 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 PHF3Q92576 2039 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 A0A096LPE4 126 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 LOC107986453A0A1B0GWG9 222 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 A0A1W2PPZ6 126 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 LOC390937A0A1W2PQ73 354 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 NOTOA8MTQ0 251 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 E9PLN8 166 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 LRRTM2O43300 516 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 XRCC2O43543 280 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 TTRP02766 147 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 SERPINA5P05154 406 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 ACSM4P0C7M7 580 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 GLI4P10075 376 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 IGHV1-2P23083 117 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 APLNRP35414 380 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 TGFBR1P36897 503 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 CAPZA1P52907 286 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 RAB1AP62820 205 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 PPP3R1P63098 170 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 HNRNPA0Q13151 305 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms