RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 CYHR1Q6ZMK1 362 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 TMCO2Q7Z6W1 182 aaPredicted RBP4.52□□□□□ -1.69
NEDD4-203ENST00000502612 FUNDC1Q8IVP5 155 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 TBC1D21Q8IYX1 336 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 CEND1Q8N111 149 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 CADM2Q8N3J6 435 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 CLDN19Q8N6F1 224 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 NATD1Q8N6N6 113 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 ANKFN1Q8N957 763 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 STXBP6Q8NFX7 210 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 OR52E4Q8NGH9 312 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 SMARCD2Q92925 531 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 CMTM7Q96FZ5 175 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 ITCHQ96J02 903 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 AMDHD1Q96NU7 426 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 MCHR1Q99705 422 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 OSBPL11Q9BXB4 747 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 OSBPL10Q9BXB5 764 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 CHIAQ9BZP6 476 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 NXF5Q9H1B4 397 aaKnown RBP4.52□□□□□ -1.69
NEDD4-203ENST00000502612 LRTM1Q9HBL6 345 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 TIMM22Q9Y584 194 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 MAB21L2Q9Y586 359 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 GREB1Q4ZG55 1949 aa4.52□□□□□ -1.69
NEDD4-203ENST00000502612 DOCK4Q8N1I0 1966 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 SHROOM3Q8TF72 1996 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 SMIM31A0A1B0GVY4 71 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 VSTM2BA6NLU5 285 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 EVPLLA8MZ36 301 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 GPR89AB7ZAQ6 455 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 GFYI3L273 518 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 WWP2O00308 870 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 MANBAO00462 879 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 KPNA3O00505 521 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 TNFSF11O14788 317 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 TAPBPO15533 448 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 PSIP1O75475 530 aaKnown RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 SCELO95171 688 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 GPR89BP0CG08 455 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 PSMC3P17980 439 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 PRPS1L1P21108 318 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 ZBTB25P24278 435 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 CXCR2P25025 360 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 SERPINB1P30740 379 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 S100A3P33764 101 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 CHI3L1P36222 383 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 CCR2P41597 374 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 PRLHRP49683 370 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 DIO3P55073 304 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 CLDN8P56748 225 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 RPS14P62263 151 aaKnown RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 RPL38P63173 70 aaKnown RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 NDPQ00604 133 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 IRF8Q02556 426 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 LIPEQ05469 1076 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 RIPPLY1Q0D2K3 151 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 GPM6BQ13491 265 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 PDK3Q15120 406 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 LRRC36Q1X8D7 754 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 HNRNPA1L2Q32P51 320 aaKnown RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 BCL7AQ4VC05 210 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 PRR30Q53SZ7 412 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 SPIN4Q56A73 249 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 ANXA8L1Q5VT79 327 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 TTC23Q5W5X9 447 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 LPCAT4Q643R3 524 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 OR5M10Q6IEU7 315 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 ZNF544Q6NX49 715 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 ERICH5Q6P6B1 374 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 RPS27LQ71UM5 84 aaKnown RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 OR9I1Q8NGQ6 314 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 CXorf40AQ8TE69 158 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 SETD7Q8WTS6 366 aaKnown RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 TESCQ96BS2 214 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 CXorf40BQ96DE9 158 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 TCEAL4Q96EI5 215 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 CENPNQ96H22 339 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 KCNA7Q96RP8 456 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 MAPKAP1Q9BPZ7 522 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 EDEM2Q9BV94 578 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 Q9H3A6 140 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 GORASP2Q9H8Y8 452 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 ZNF702PQ9H963 129 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 FANCFQ9NPI8 374 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 CCL26Q9Y258 94 aa4.51□□□□□ -1.69
NEDD4-203ENST00000502612 MRPS33Q9Y291 106 aaKnown RBP4.51□□□□□ -1.69
NEDD4-203ENST00000502612 LOC730098B7Z3J9 87 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 H0YIV9 168 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 NME4O00746 187 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 IGHV3-23P01764 117 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 STSP08842 583 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 OR8U8P0C7N1 319 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 CISD3P0C7P0 127 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 PRG2P13727 222 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 IGLL1P15814 213 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 IL1RNP18510 177 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 ZP3P21754 424 aa4.5□□□□□ -1.69
NEDD4-203ENST00000502612 CALRP27797 417 aaKnown RBP4.5□□□□□ -1.69
NEDD4-203ENST00000502612 PRDX3P30048 256 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms