RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 DEFB109BQ30KR1 87 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 CDONQ4KMG0 1287 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 CCDC58Q4VC31 144 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 FAM209AQ5JX71 171 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 ATP1A1-AS1Q5TC04 95 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 LINC01590Q5TEZ4 76 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 HBMQ6B0K9 141 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF544Q6NX49 715 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 RPL22L1Q6P5R6 122 aaKnown RBP4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 KCTD18Q6PI47 426 aaPredicted RBP4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 IGFL2Q6UWQ7 119 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 PAMR1Q6UXH9 720 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 CHMP1BQ7LBR1 199 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 GALNTL5Q7Z4T8 443 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 GPAT4Q86UL3 456 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC22A16Q86VW1 577 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 PHC2Q8IXK0 858 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 BCL6BQ8N143 479 aaPredicted RBP4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 SYT14Q8NB59 555 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF485Q8NCK3 441 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 MDS2Q8NDY4 140 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 OR10H5Q8NGA6 315 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 OR6N2Q8NGY6 317 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 OR6X1Q8NH79 312 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 OR2V1Q8NHB1 315 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 ZPLD1Q8TCW7 415 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 THEM6Q8WUY1 208 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNRF4Q8WWF5 429 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 ASB17Q8WXJ9 295 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 TM9SF4Q92544 642 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 SCMH1Q96GD3 660 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 TXNDC15Q96J42 360 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 C4orf36Q96KX1 117 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 TSSK2Q96PF2 358 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF649Q9BS31 505 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 TTTY12Q9BZ98 90 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 DCSTAMPQ9H295 470 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 KCNN2Q9H2S1 579 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 WDR76Q9H967 626 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 MARCH7Q9H992 704 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 MOV10Q9HCE1 1003 aaKnown RBP4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 MED29Q9NX70 200 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 KLHL9Q9P2J3 617 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 CPAMD8Q8IZJ3 1885 aa4.68□□□□□ -1.66
HMGXB4-208ENST00000498325 IGLV1-36A0A0B4J1U3 117 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TRAV17A0A0B4J275 112 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 A0A0G2JMM0 328 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 PNMA8CA0A1B0GUJ8 204 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TRDV1A0A1B0GX56 115 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 A0A1W2PPB8 328 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 A0A1W2PRS3 328 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 PINLYPA6NC86 204 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TVP23AA6NH52 213 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 METTL15A6NJ78 407 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 KIR3DP1A8MWS1 328 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 BOLA2-SMG1P6H3BVE0 249 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 DCTN6O00399 190 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF593O00488 134 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 GPR171O14626 319 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 OGG1O15527 345 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 PLPP2O43688 288 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TRAF3IP2O43734 574 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 CXCL13O43927 109 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 GPRIN2O60269 458 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 SELENOFO60613 162 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 GPX5O75715 221 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 AQP8O94778 261 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 GLSO94925 669 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 SYNGR4O95473 234 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ACTL6AO96019 429 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 IL1AP01583 271 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TFP02787 698 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 HRGP04196 525 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 KRT8P05787 483 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 GAAP10253 952 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ALOX5APP20292 161 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 EDNRAP25101 427 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 APEX1P27695 318 aaKnown RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 LAP3P28838 519 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 CRYBB2P43320 205 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 MAGEA5P43359 124 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TGM4P49221 684 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TNFSF10P50591 281 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 P2RY4P51582 365 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 BMXP51813 675 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 HCCSP53701 268 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 CLDN17P56750 224 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 CLDN20P56880 219 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 OR12D2P58182 307 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 NCS1P62166 190 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 PPIAP62937 165 aaKnown RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 SIRPAP78324 504 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ADAM8P78325 824 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 RUNX1T1Q06455 604 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 AQP6Q13520 282 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 CAMK2DQ13557 499 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 OXA1LQ15070 435 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 INAQ16352 499 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TP53I3Q53FA7 332 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TEX30Q5JUR7 227 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms