RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 ELMOD2Q8IZ81 293 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 WDFY2Q96P53 400 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 ZNF385AQ96PM9 386 aaKnown RBP7.41□□□□□ -1.22
USP54-215ENST00000497106 HES7Q9BYE0 225 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 SLC25A18Q9H1K4 315 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 ZCCHC4Q9H5U6 513 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 CYB5R1Q9UHQ9 305 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 GPR160Q9UJ42 338 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 FAM240BA0A1B0GVZ2 78 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 TMEM8BA6NDV4 472 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 C17orf51A8MQB3 221 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 J3QRE1 110 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 PTTG1O95997 202 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 DHFRP00374 187 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 HTR2CP28335 458 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 TNFSF8P32971 234 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 GFRA1P56159 465 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 RAB25P57735 213 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 ZNF121P58317 390 aaPredicted RBP7.41□□□□□ -1.22
USP54-215ENST00000497106 FOXO1Q12778 655 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 CORO6Q6QEF8 472 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 TUSC5Q8IXB3 177 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 SLC17A5Q9NRA2 495 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 CLEC4AQ9UMR7 237 aa7.41□□□□□ -1.22
USP54-215ENST00000497106 A0A0A6YYH2 397 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 A6NJ64 397 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 ZNF780AO75290 641 aaPredicted RBP7.4□□□□□ -1.22
USP54-215ENST00000497106 UPK1BO75841 260 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 TMIGD3P0DMS9 266 aaPredicted RBP7.4□□□□□ -1.22
USP54-215ENST00000497106 ARSBP15848 533 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 AZGP1P25311 298 aaKnown RBP7.4□□□□□ -1.22
USP54-215ENST00000497106 CDAP32320 146 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 OPRM1P35372 400 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 ACTBP60709 375 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 ACTG1P63261 375 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 HES5Q5TA89 166 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 Q6ZNX1 250 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 ZNF627Q7L945 461 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 SPACA3Q8IXA5 215 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 CDH26Q8IXH8 852 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 OR1M1Q8NGA1 313 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 DDOQ99489 341 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 SPOCK3Q9BQ16 436 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 MRPL13Q9BYD1 178 aaKnown RBP7.4□□□□□ -1.22
USP54-215ENST00000497106 PIGMQ9H3S5 423 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 BCO1Q9HAY6 547 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 B3GAT1Q9P2W7 334 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 SLC5A6Q9Y289 635 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 LOC100289279A0A1B0GTE1 492 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 NAP1L6A6NFF2 107 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 DVL2O14641 736 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 PCSK6P29122 969 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 DDOSTP39656 456 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 EIF2B2P49770 351 aaKnown RBP7.4□□□□□ -1.22
USP54-215ENST00000497106 B3GALT5-AS1P59052 145 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 C19orf48Q6RUI8 117 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 ABHD3Q8WU67 409 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 DERL3Q96Q80 235 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 TIMP4Q99727 224 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 MICU1Q9BPX6 476 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 GLS2Q9UI32 602 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 SPATA2Q9UM82 520 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 KNTC1P50748 2209 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 OR4C45A6NMZ5 311 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 TSPAN9O75954 239 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 TUBG1P23258 451 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 APEX1P27695 318 aaKnown RBP7.4□□□□□ -1.22
USP54-215ENST00000497106 GSG1Q2KHT4 349 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 FAM214BQ7L5A3 538 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 KRT74Q7RTS7 529 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 ADGRE4PQ86SQ3 457 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 IZUMO1Q8IYV9 350 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 Q8N402 240 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 IL17RDQ8NFM7 739 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 SCGB3A2Q96PL1 93 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 ATG5Q9H1Y0 275 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 ZDHHC11Q9H8X9 412 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 TUBG2Q9NRH3 451 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 COPZ2Q9P299 210 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 TUBD1Q9UJT1 453 aa7.4□□□□□ -1.22
USP54-215ENST00000497106 A0A1W2PNU3 283 aaPredicted RBP7.4□□□□□ -1.23
USP54-215ENST00000497106 ZFPL1O95159 310 aa7.4□□□□□ -1.23
USP54-215ENST00000497106 IGHG3P01860 377 aa7.4□□□□□ -1.23
USP54-215ENST00000497106 H3F3AP84243 136 aa7.4□□□□□ -1.23
USP54-215ENST00000497106 MTFR2Q6P444 385 aa7.4□□□□□ -1.23
USP54-215ENST00000497106 IGFL2Q6UWQ7 119 aa7.4□□□□□ -1.23
USP54-215ENST00000497106 STAC2Q6ZMT1 411 aa7.4□□□□□ -1.23
USP54-215ENST00000497106 KCNG3Q8TAE7 436 aa7.4□□□□□ -1.23
USP54-215ENST00000497106 PROK2Q9HC23 129 aa7.4□□□□□ -1.23
USP54-215ENST00000497106 ORC5O43913 435 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 EFNA2O43921 213 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 THBS2P35442 1172 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 FHL1Q13642 323 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 RSU1Q15404 277 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 ETFDHQ16134 617 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 LHFPL2Q6ZUX7 228 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 TMEM17Q86X19 198 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 FGGYQ96C11 551 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 SLIRPQ9GZT3 109 aaKnown RBP7.39□□□□□ -1.23
USP54-215ENST00000497106 DPAGT1Q9H3H5 408 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms