RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 DCAF12L2Q5VW00 463 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.49
VTI1A-209ENST00000496445 COLCA1Q6ZS62 124 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
VTI1A-209ENST00000496445 OR4C15Q8NGM1 316 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 OR8D4Q8NGM9 314 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 WDR76Q9H967 626 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 GCM1Q9NP62 436 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 NDE1Q9NXR1 346 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 CYB5R1Q9UHQ9 305 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 PPP1R3CQ9UQK1 317 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 CDH10Q9Y6N8 788 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 A0A0A6YYJ9 748 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 F5H0A9 414 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-209ENST00000496445 BHLHE40O14503 412 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 IDH3BO43837 385 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 ACSM4P0C7M7 580 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 ANOS1P23352 680 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 NOS3P29474 1203 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 HMGA2P52926 109 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 TMEM155Q4W5P6 130 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 FITM2Q8N6M3 262 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 OR8G5Q8NG78 346 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 OR52E2Q8NGJ4 325 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 OR5L1Q8NGL2 311 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 OR10S1Q8NGN2 331 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 ZNRF4Q8WWF5 429 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 MEGF10Q96KG7 1140 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 DDOQ99489 341 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 ATF6BQ99941 703 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 SLC30A2Q9BRI3 323 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 VNN3Q9NY84 501 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 ACTR3BQ9P1U1 418 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 TRRAPQ9Y4A5 3859 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 CMYA5Q8N3K9 4069 aa12.01□□□□□ -0.49
VTI1A-209ENST00000496445 A0A1B0GWJ7 208 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 IQCF6A8MYZ5 107 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 TMEM178BH3BS89 294 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 TNFRSF11BO00300 401 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 SURF4O15260 269 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 KRT36O76013 467 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 SBK2P0C263 348 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 GATA3P23771 443 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 PYCR1P32322 319 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 RPS27P42677 84 aaKnown RBP12□□□□□ -0.49
VTI1A-209ENST00000496445 HILS1P60008 231 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 TRAP1Q12931 704 aaKnown RBP12□□□□□ -0.49
VTI1A-209ENST00000496445 PPP1R8Q12972 351 aaKnown RBP12□□□□□ -0.49
VTI1A-209ENST00000496445 SCGB2A2Q13296 93 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 SLC36A3Q495N2 470 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 LYPD4Q6UWN0 246 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 USP43Q70EL4 1123 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 NAA40Q86UY6 237 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 LRRC28Q86X40 367 aaPredicted RBP12□□□□□ -0.49
VTI1A-209ENST00000496445 TEX29Q8N6K0 151 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 ATG16L2Q8NAA4 619 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 CYB561A3Q8NBI2 242 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 BHLHE23Q8NDY6 225 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 DEFB108BQ8NET1 73 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF420Q8TAQ5 688 aaPredicted RBP12□□□□□ -0.49
VTI1A-209ENST00000496445 ST7LQ8TDW4 575 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 ZFAND2BQ8WV99 257 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 MAP6Q96JE9 813 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 SLC6A7Q99884 636 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 TRIM15Q9C019 465 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 PATZ1Q9HBE1 687 aaKnown RBP12□□□□□ -0.49
VTI1A-209ENST00000496445 MMP26Q9NRE1 261 aa12□□□□□ -0.49
VTI1A-209ENST00000496445 PPIAL4EA0A075B759 164 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 PPIAL4CA0A0B4J2A2 164 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 IGHV3-64DA0A0J9YX35 117 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 TVP23AA6NH52 213 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 A8MXK9 166 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 PPIAL4DF5H284 164 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 F5H5K5 113 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 F5H5P2 479 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 FOXH1O75593 365 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 CYB5R3P00387 301 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-209ENST00000496445 GASTP01350 101 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 HLA-DQA2P01906 255 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 PPIAL4FP0DN26 164 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 SELEP16581 610 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 GK2Q14410 553 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF362Q5T0B9 420 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-209ENST00000496445 LCN8Q6JVE9 175 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 RPL13AP3Q6NVV1 102 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 KLHL36Q8N4N3 616 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 OR52L1Q8NGH7 329 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 OR13G1Q8NGZ3 307 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF418Q8TF45 676 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF582Q96NG8 517 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-209ENST00000496445 PITX2Q99697 317 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 C7orf69Q9H7B7 122 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 IL20Q9NYY1 176 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 PCDHB10Q9UN67 800 aa11.99□□□□□ -0.49
VTI1A-209ENST00000496445 POLR3KQ9Y2Y1 108 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-209ENST00000496445 CEACAM18A8MTB9 384 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 B2RBV5 119 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 TRAPPC2LH3BP13 241 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms