RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	ECH1	Q13011	328 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	TMED1	Q13445	227 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	EIF2B1	Q14232	305 aa	Known RBP	10.22	□□□□□ -0.77
APTX-233	ENST00000496030	SWI5	Q1ZZU3	235 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	TMEM255A	Q5JRV8	349 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	TTC23	Q5W5X9	447 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	C11orf71	Q6IPW1	123 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	LAIR2	Q6ISS4	152 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	ZNF544	Q6NX49	715 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	C20orf204	Q6ZNR8	217 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	RFPL4B	Q6ZWI9	263 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	SHF	Q7M4L6	423 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	LRP11	Q86VZ4	500 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	ZNF454	Q8N9F8	522 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	ZNF555	Q8NEP9	628 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	CYGB	Q8WWM9	190 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	SLAMF6	Q96DU3	332 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	ATF6B	Q99941	703 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.22	□□□□□ -0.77
APTX-233	ENST00000496030	ADI1	Q9BV57	179 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	POFUT1	Q9H488	388 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	COPS3	Q9UNS2	423 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	STARD10	Q9Y365	291 aa		10.22	□□□□□ -0.77
APTX-233	ENST00000496030	C5orf63	A6NC05	138 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	RNF212B	A8MTL3	300 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	SMAD7	O15105	426 aa	Known RBP	10.21	□□□□□ -0.77
APTX-233	ENST00000496030	OR4A8	P0C604	315 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	ZNF250	P15622	560 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	SERPINF1	P36955	418 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	CAPG	P40121	348 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	OPRL1	P41146	370 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	FABP6	P51161	128 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	AQP4	P55087	323 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	GALK2	Q01415	458 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	MAD2L1BP	Q15013	274 aa	Predicted RBP	10.21	□□□□□ -0.77
APTX-233	ENST00000496030	EFNB3	Q15768	340 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	LCN1P1	Q5VSP4	162 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	MEDAG	Q5VYS4	303 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	VHLL	Q6RSH7	139 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	SPATC1	Q76KD6	591 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	RHOU	Q7L0Q8	258 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	RFLNB	Q8N5W9	214 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	FBLIM1	Q8WUP2	373 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	MARS2	Q96GW9	593 aa	Known RBP	10.21	□□□□□ -0.77
APTX-233	ENST00000496030	DCLRE1C	Q96SD1	692 aa	Known RBP	10.21	□□□□□ -0.77
APTX-233	ENST00000496030	CNN2	Q99439	309 aa	Known RBP	10.21	□□□□□ -0.77
APTX-233	ENST00000496030	DOK1	Q99704	481 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	C1QTNF5	Q9BXJ0	243 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	OR51B6	Q9H340	312 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	TBCCD1	Q9NVR7	557 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	LAMP3	Q9UQV4	416 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	GRIP1	Q9Y3R0	1128 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030	SPEF1	Q9Y4P9	236 aa		10.21	□□□□□ -0.77
APTX-233	ENST00000496030		F5H5K5	113 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	MPZL2	O60487	215 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	APOL3	O95236	402 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	LYN	P07948	512 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	RAD52	P43351	418 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	MTNR1A	P48039	350 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	PPP1CB	P62140	327 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	ROM1	Q03395	351 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	IL18R1	Q13478	541 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	SMN1	Q16637	294 aa	Known RBP	10.2	□□□□□ -0.78
APTX-233	ENST00000496030		Q5PR19	223 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	C6orf52	Q5T4I8	152 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	SHE	Q5VZ18	495 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	PRSS45	Q7RTY3	260 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	MUC15	Q8N387	334 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	OR51G2	Q8NGK0	314 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	OR1J1	Q8NGS3	322 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	ABHD4	Q8TB40	342 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	THEM6	Q8WUY1	208 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	RFK	Q969G6	155 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	MRPL24	Q96A35	216 aa	Known RBP	10.2	□□□□□ -0.78
APTX-233	ENST00000496030	KCNJ15	Q99712	375 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	APOL4	Q9BPW4	351 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	MRPL37	Q9BZE1	423 aa	Known RBP	10.2	□□□□□ -0.78
APTX-233	ENST00000496030	BCL2L14	Q9BZR8	327 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	PLK3	Q9H4B4	646 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	AMBN	Q9NP70	447 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	CENPM	Q9NSP4	180 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	CBLN4	Q9NTU7	201 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	CLN6	Q9NWW5	311 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	SLCO1C1	Q9NYB5	712 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	MYEF2	Q9P2K5	600 aa	Known RBP	10.2	□□□□□ -0.78
APTX-233	ENST00000496030	EIF3K	Q9UBQ5	218 aa	Known RBP	10.2	□□□□□ -0.78
APTX-233	ENST00000496030	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
APTX-233	ENST00000496030	EXOG	Q9Y2C4	368 aa	Known RBP	10.2	□□□□□ -0.78
APTX-233	ENST00000496030	CMAHP	Q9Y471	501 aa		10.2	□□□□□ -0.78
APTX-233	ENST00000496030	ANK3	Q12955	4377 aa	Known RBP	10.19	□□□□□ -0.78
APTX-233	ENST00000496030	IGLV3-9	A0A075B6K5	115 aa		10.19	□□□□□ -0.78
APTX-233	ENST00000496030	ZNF878	C9JN71	531 aa		10.19	□□□□□ -0.78
APTX-233	ENST00000496030	MAGEB4	O15481	346 aa	Predicted RBP	10.19	□□□□□ -0.78
APTX-233	ENST00000496030	ABHD16A	O95870	558 aa		10.19	□□□□□ -0.78
APTX-233	ENST00000496030	CLPTM1	O96005	669 aa		10.19	□□□□□ -0.78
APTX-233	ENST00000496030	LCK	P06239	509 aa		10.19	□□□□□ -0.78
APTX-233	ENST00000496030	PAX1	P15863	534 aa		10.19	□□□□□ -0.78
APTX-233	ENST00000496030	MPV17	P39210	176 aa		10.19	□□□□□ -0.78
APTX-233	ENST00000496030	PRKX	P51817	358 aa		10.19	□□□□□ -0.78
APTX-233	ENST00000496030	NUDT6	P53370	316 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms