RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ANOS1P23352 680 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 HRH1P35367 487 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 C1orf100Q5SVJ3 147 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 C11orf87Q6NUJ2 197 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF813Q6ZN06 617 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF441Q8N8Z8 693 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 ADAD2Q8NCV1 583 aaKnown RBP11.61□□□□□ -0.55
PTPN7-217ENST00000495688 FBXW5Q969U6 566 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF471Q9BX82 626 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-217ENST00000495688 BARX1Q9HBU1 254 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-217ENST00000495688 RASL12Q9NYN1 266 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 NPIPA1Q9UND3 350 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 TNFSF18Q9UNG2 199 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 CELSR3Q9NYQ7 3312 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 A0A1W2PR77 199 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 MEGF11A6BM72 1044 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 OR2AT4A6NND4 320 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 TTRP02766 147 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 ISG15P05161 165 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 CD96P40200 585 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 HSD11B2P80365 405 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 C17orf82Q86X59 251 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-217ENST00000495688 OR2I1PQ8NGU4 316 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 ZC3H10Q96K80 434 aaKnown RBP11.6□□□□□ -0.55
PTPN7-217ENST00000495688 KCNK17Q96T54 332 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 SOX7Q9BT81 388 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 SLCO5A1Q9H2Y9 848 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 LDAHQ9H6V9 325 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 UCK1Q9HA47 277 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 GPN3Q9UHW5 284 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-217ENST00000495688 OR2T1O43869 369 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 NAGAP17050 411 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 AKR1C4P17516 323 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 VAMP1P23763 118 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 ZBTB25P24278 435 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 TLE3Q04726 772 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 PTCRAQ6ISU1 281 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-217ENST00000495688 KCTD9Q7L273 389 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 KCNRGQ8N5I3 272 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 SMRP1Q8NCR6 262 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 OR13C9Q8NGT0 318 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 NICN1Q9BSH3 213 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 FN3KRPQ9HA64 309 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 RALGAPA1Q6GYQ0 2036 aa11.6□□□□□ -0.55
PTPN7-217ENST00000495688 KANTRA0A1W2PQU2 76 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF217O75362 1048 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 VSIG8P0DPA2 414 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 CTRB1P17538 263 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 BDKRB2P30411 391 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 DLSTP36957 453 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 STARP49675 285 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 IL13RA1P78552 427 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 TDGQ13569 410 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 C14orf28Q4W4Y0 310 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 CTRB2Q6GPI1 263 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF704Q6ZNC4 412 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-217ENST00000495688 EIF4E3Q8N5X7 224 aaKnown RBP11.59□□□□□ -0.55
PTPN7-217ENST00000495688 SELENOIQ9C0D9 397 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 SLC25A32Q9H2D1 315 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 FAM206AQ9NX38 181 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 TAS2R3Q9NYW6 316 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 COL5A1P20908 1838 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-217ENST00000495688 A0A0D9SG52 128 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 C9orf170A2RU37 121 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 CPED1A4D0V7 1026 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 METTL21EPA6NDL7 271 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 DISC1C4P0D8 188 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 EEF1E1-BLOC1S5C9J1V9 151 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 STK17BO94768 372 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 ERCC1P07992 297 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-217ENST00000495688 UBBP0CG47 229 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 UBCP0CG48 685 aaKnown RBP11.59□□□□□ -0.55
PTPN7-217ENST00000495688 SLC2A1P11166 492 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 AGTR1P30556 359 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 RPS27AP62979 156 aaKnown RBP11.59□□□□□ -0.55
PTPN7-217ENST00000495688 UBA52P62987 128 aaKnown RBP11.59□□□□□ -0.55
PTPN7-217ENST00000495688 RNF4P78317 190 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 HSF1Q00613 529 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 DEFA5Q01523 94 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 RIPPLY1Q0D2K3 151 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 TMEM244Q5VVB8 128 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 UNQ6126/PRO20091Q6UXV3 157 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 LYG2Q86SG7 212 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 SLC25A42Q86VD7 318 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 TSTD1Q8NFU3 115 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 OR10S1Q8NGN2 331 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 C11orf40Q8WZ69 217 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 SLAMF6Q96DU3 332 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 MVB12AQ96EY5 273 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 C5orf34Q96MH7 638 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 MYOZ1Q9NP98 299 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-217ENST00000495688 COMMD9Q9P000 198 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 KCNK7Q9Y2U2 307 aa11.59□□□□□ -0.55
PTPN7-217ENST00000495688 IGHV1OR21-1A0A087WYE8 117 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 SYT7O43581 403 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 PMP2P02689 132 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 PCK2Q16822 640 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 H1FNTQ75WM6 255 aaPredicted RBP11.58□□□□□ -0.56
PTPN7-217ENST00000495688 FAM219AQ8IW50 185 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms