RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 GNB2P62879 340 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 MEP1BQ16820 701 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 ZNF181Q2M3W8 571 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 DNM1P34Q6PK57 102 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 C9orf139Q6ZV77 190 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.48■□□□□ 0.55
HDDC3-203ENST00000494993 MOGAT3Q86VF5 341 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 BHLHE23Q8NDY6 225 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 UPRTQ96BW1 309 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 NEIL1Q96FI4 390 aaPredicted RBP18.48■□□□□ 0.55
HDDC3-203ENST00000494993 KCTD14Q9BQ13 255 aaPredicted RBP18.48■□□□□ 0.55
HDDC3-203ENST00000494993 TMEM246Q9BRR3 403 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 EFCAB1Q9HAE3 211 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 NDUFAF4Q9P032 175 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 IGHV3OR16-10A0A075B7F0 116 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 TRBV4-1A0A0J9YWV2 114 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 IGHV3-64DA0A0J9YX35 117 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 UNC119BA6NIH7 251 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 F5H5P2 479 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 DCTN6O00399 190 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 NDUFAB1O14561 156 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 RHCEP18577 417 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 MTNR1AP48039 350 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 CENPAP49450 140 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 SEC23BQ15437 767 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 SLC9A3R2Q15599 337 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 CORO6Q6QEF8 472 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 HACD2Q6Y1H2 254 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 C1orf87Q8N0U7 546 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 RAB40AQ8WXH6 277 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 DACT3Q96B18 629 aaPredicted RBP18.47■□□□□ 0.55
HDDC3-203ENST00000494993 PLEKHA8Q96JA3 519 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 CCDC134Q9H6E4 229 aa18.47■□□□□ 0.55
HDDC3-203ENST00000494993 UNKLQ9H9P5 680 aaKnown RBP18.47■□□□□ 0.55
HDDC3-203ENST00000494993 KRCC1Q9NPI7 259 aaPredicted RBP18.47■□□□□ 0.55
HDDC3-203ENST00000494993 IGLV1-36A0A0B4J1U3 117 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 A0A1B0GWJ7 208 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 LRRC30A6NM36 301 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 FSTL3O95633 263 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 PLATP00750 562 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 NUDT2P50583 147 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 IL13RA1P78552 427 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 COX10Q12887 443 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 RSPO1Q2MKA7 263 aaPredicted RBP18.46■□□□□ 0.55
HDDC3-203ENST00000494993 ZNF404Q494X3 552 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 LEG1Q6P5S2 330 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 SMARCD3Q6STE5 483 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 COLCA1Q6ZS62 124 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 C7orf34Q96L11 122 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 DHRS1Q96LJ7 313 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 WDR76Q9H967 626 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 TMEM100Q9NV29 134 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 ABCD2Q9UBJ2 740 aa18.46■□□□□ 0.55
HDDC3-203ENST00000494993 TRAV40A0A0B4J280 105 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 KCNAB3O43448 404 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 CCDC22O60826 627 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 DIRAS1O95057 198 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 PPP1R3DO95685 299 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 SELEP16581 610 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 PMELP40967 661 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 KRTAP27-1Q3LI81 207 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 FAM201AQ5SY85 155 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 JAZF1Q86VZ6 243 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 OR8B3Q8NGG8 313 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 ERMAPQ96PL5 475 aaPredicted RBP18.45■□□□□ 0.54
HDDC3-203ENST00000494993 OR8B2Q96RD0 313 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 FUZQ9BT04 418 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 HCAR1Q9BXC0 346 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 B9D1Q9UPM9 204 aa18.45■□□□□ 0.54
HDDC3-203ENST00000494993 SOX21Q9Y651 276 aaPredicted RBP18.45■□□□□ 0.54
HDDC3-203ENST00000494993 HLA-DPB1P04440 258 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 FPR3P25089 353 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 GATA4P43694 442 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 PITPNBP48739 271 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 NLRC3Q7RTR2 1065 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 OR6V1Q8N148 313 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 SLC26A10Q8NG04 563 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 OR52J3Q8NH60 311 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 FANK1Q8TC84 345 aa18.44■□□□□ 0.54
HDDC3-203ENST00000494993 SRA1Q9HD15 236 aaKnown RBP18.44■□□□□ 0.54
HDDC3-203ENST00000494993 KIR2DS1A0A191URI9 304 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 POM121CA8CG34 1229 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 ACSM4P0C7M7 580 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 MDH1P40925 334 aaKnown RBP18.43■□□□□ 0.54
HDDC3-203ENST00000494993 PRSS12P56730 875 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 GLYATQ6IB77 296 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 SLC18B1Q6NT16 456 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 CFAP77Q6ZQR2 320 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 LINC00346Q8IVM7 164 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 FAM86B1Q8N7N1 296 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 NMNAT3Q96T66 252 aa18.43■□□□□ 0.54
HDDC3-203ENST00000494993 NUDT16L1Q9BRJ7 211 aaKnown RBP18.43■□□□□ 0.54
HDDC3-203ENST00000494993 DCAF13Q9NV06 445 aaKnown RBP18.43■□□□□ 0.54
HDDC3-203ENST00000494993 SAMD4AQ9UPU9 718 aaKnown RBP18.43■□□□□ 0.54
HDDC3-203ENST00000494993 ARPC3O15145 178 aa18.42■□□□□ 0.54
HDDC3-203ENST00000494993 RENP00797 406 aa18.42■□□□□ 0.54
HDDC3-203ENST00000494993 IRF2P14316 349 aa18.42■□□□□ 0.54
HDDC3-203ENST00000494993 PSME3P61289 254 aa18.42■□□□□ 0.54
HDDC3-203ENST00000494993 DBPQ10586 325 aaPredicted RBP18.42■□□□□ 0.54
HDDC3-203ENST00000494993 MAB21L1Q13394 359 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms