RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CYB5R3P00387 301 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-208ENST00000494780 NCK1P16333 377 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 MTNR1AP48039 350 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 CENPAP49450 140 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 C9orf139Q6ZV77 190 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 PARP8Q8N3A8 854 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 SLC25A28Q96A46 364 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 PLEKHA8Q96JA3 519 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 IGHV2-70DA0A0C4DH43 119 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 TRBV4-1A0A0J9YWV2 114 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 A0A1B0GWJ7 208 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 MLNRO43193 412 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 ZNF205O95201 554 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 SELEP16581 610 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 GNB2P62879 340 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 COX10Q12887 443 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 MEP1BQ16820 701 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 SMARCD3Q6STE5 483 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 COLCA1Q6ZS62 124 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 C1orf87Q8N0U7 546 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 RAB40AQ8WXH6 277 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 UPRTQ96BW1 309 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 NEIL1Q96FI4 390 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-208ENST00000494780 TSSK2Q96PF2 358 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 TMEM246Q9BRR3 403 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 ABCD2Q9UBJ2 740 aa19.45■□□□□ 0.7
COL27A1-208ENST00000494780 IGLV1-36A0A0B4J1U3 117 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 F5H5P2 479 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 DCTN6O00399 190 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 GPANK1O95872 356 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 IGHV4-38-2P0DP08 117 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 NUDT2P50583 147 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 SEC23BQ15437 767 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 ZNF404Q494X3 552 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-208ENST00000494780 MOGAT3Q86VF5 341 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 DACT3Q96B18 629 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-208ENST00000494780 C7orf34Q96L11 122 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 DHRS1Q96LJ7 313 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 HCAR1Q9BXC0 346 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 TMEM100Q9NV29 134 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 B9D1Q9UPM9 204 aa19.44■□□□□ 0.7
COL27A1-208ENST00000494780 PLATP00750 562 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 IL13RA1P78552 427 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 SLC9A3R2Q15599 337 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 RSPO1Q2MKA7 263 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-208ENST00000494780 KRTAP27-1Q3LI81 207 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 CORO6Q6QEF8 472 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 NLRC3Q7RTR2 1065 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 BHLHE23Q8NDY6 225 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 OR8B3Q8NGG8 313 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 ERMAPQ96PL5 475 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-208ENST00000494780 OR8B2Q96RD0 313 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 FUZQ9BT04 418 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 UNKLQ9H9P5 680 aaKnown RBP19.43■□□□□ 0.7
COL27A1-208ENST00000494780 DCAF13Q9NV06 445 aaKnown RBP19.43■□□□□ 0.7
COL27A1-208ENST00000494780 SAMD4AQ9UPU9 718 aaKnown RBP19.43■□□□□ 0.7
COL27A1-208ENST00000494780 MEGF8Q7Z7M0 2845 aa19.43■□□□□ 0.7
COL27A1-208ENST00000494780 KIR2DS1A0A191URI9 304 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 POM121CA8CG34 1229 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 PPP1R3DO95685 299 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 FPR3P25089 353 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 GATA4P43694 442 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 KRT72Q14CN4 511 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 GLYATQ6IB77 296 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 LEG1Q6P5S2 330 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 JAZF1Q86VZ6 243 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 OR6V1Q8N148 313 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 CELF2-AS1Q8N7Q2 184 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 SLC26A10Q8NG04 563 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 WDR76Q9H967 626 aa19.42■□□□□ 0.7
COL27A1-208ENST00000494780 SRA1Q9HD15 236 aaKnown RBP19.42■□□□□ 0.7
COL27A1-208ENST00000494780 IGHV3OR16-10A0A075B7F0 116 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 IGHV3-64DA0A0J9YX35 117 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 ARPC3O15145 178 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 DIRAS1O95057 198 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 RENP00797 406 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 IRF2P14316 349 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 SLC6A6P31641 620 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 MDH1P40925 334 aaKnown RBP19.41■□□□□ 0.7
COL27A1-208ENST00000494780 PMELP40967 661 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 PITPNBP48739 271 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 PSME3P61289 254 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 ECH1Q13011 328 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 RFX4Q33E94 735 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 SLC36A3Q495N2 470 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 OR52J3Q8NH60 311 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 FANK1Q8TC84 345 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 ERGIC1Q969X5 290 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 NMNAT3Q96T66 252 aa19.41■□□□□ 0.7
COL27A1-208ENST00000494780 HLA-DPB1P04440 258 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 ACSM4P0C7M7 580 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 SMIM11AP58511 58 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 GK2Q14410 553 aaPredicted RBP19.4■□□□□ 0.7
COL27A1-208ENST00000494780 FAM201AQ5SY85 155 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 SLC18B1Q6NT16 456 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 CFAP77Q6ZQR2 320 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 DCDC5Q6ZRR9 648 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 Q8TCH9 128 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 PITX2Q99697 317 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms