RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 WBP4O75554 376 aaKnown RBP2.77□□□□□ -1.97
SMC4-224ENST00000494612 TSPAN13O95857 204 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 IGKV3-11P04433 115 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 PABPC4LP0CB38 370 aaKnown RBP2.77□□□□□ -1.97
SMC4-224ENST00000494612 TROVE2P10155 538 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMC4-224ENST00000494612 ZNF43P17038 809 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 HRH1P35367 487 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 MAS1LP35410 378 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 TMED10P49755 219 aaKnown RBP2.77□□□□□ -1.97
SMC4-224ENST00000494612 ACLYP53396 1101 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 CDH6P55285 790 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 TWF1Q12792 350 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 CLINT1Q14677 625 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 DEFB116Q30KQ4 102 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 ALKBH6Q3KRA9 238 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 CAVIN4Q5BKX8 364 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 VAX1Q5SQQ9 334 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 HES5Q5TA89 166 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 LINC01551Q86U37 167 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 PCP2Q8IVA1 136 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 PDIK1LQ8N165 341 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 BBOF1Q8ND07 529 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 RASD2Q96D21 266 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 STARD4Q96DR4 205 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 TPK1Q9H3S4 243 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 NCOR1P1Q9H4R4 102 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 PATZ1Q9HBE1 687 aaKnown RBP2.77□□□□□ -1.97
SMC4-224ENST00000494612 RAB20Q9NX57 234 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 PITPNC1Q9UKF7 332 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 TBX21Q9UL17 535 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 ING4Q9UNL4 249 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 PSG11Q9UQ72 335 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 DOCK1Q14185 1865 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 ARHGAP21Q5T5U3 1957 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 PTPRFP10586 1907 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 MYH13Q9UKX3 1938 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 SMCO3A2RU48 225 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 LRRIQ4A6NIV6 560 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 LRRIQ3A6PVS8 624 aaPredicted RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 SPECC1L-ADORA2AF8WAN1 911 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 EIF3HO15372 352 aaKnown RBP eCLIP2.76□□□□□ -1.97
SMC4-224ENST00000494612 MAGEB4O15481 346 aaPredicted RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 CLOCKO15516 846 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 DPM1O60762 260 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 ENTPD5O75356 428 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 EEDO75530 441 aaKnown RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 OR2J3O76001 311 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 GABARAPO95166 117 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 C6orf47O95873 294 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 TLX1NBP0CAT3 122 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 SMIM10L1P0DMW3 83 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 ZNF823P16415 610 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 LONP1P36776 959 aaKnown RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 CDKN2BP42772 138 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 NSG1P42857 185 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 CYB561P49447 251 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 PRRX1P54821 245 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 HERVK_113P61574 105 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 TGM3Q08188 693 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 SLAQ13239 276 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 EIF4EBP2Q13542 120 aaPredicted RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 WDR43Q15061 677 aaKnown RBP eCLIP2.76□□□□□ -1.97
SMC4-224ENST00000494612 XKR7Q5GH72 579 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 TMEM31Q5JXX7 168 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 PPM1LQ5SGD2 360 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 LY6G6FQ5SQ64 297 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 CCNJQ5T5M9 372 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 ARMC12Q5T9G4 340 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 ZNF691Q5VV52 312 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 MFSD14CQ5VZR4 134 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 SPECC1LQ69YQ0 1117 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 APOBEC3HQ6NTF7 200 aaKnown RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 LYPD2Q6UXB3 125 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 Q6ZSR3 168 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 MMAAQ8IVH4 418 aaKnown RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 STPG2Q8N412 459 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 AGR3Q8TD06 166 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 CD300LFQ8TDQ1 290 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 GPR151Q8TDV0 419 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 STARD8Q92502 1023 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 PIK3IP1Q96FE7 263 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 SMIM10Q96HG1 83 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 SERPINB12Q96P63 405 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 SLC17A9Q9BYT1 436 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 OR51M1Q9H341 326 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 SLC40A1Q9NP59 571 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 DDX18Q9NVP1 670 aaKnown RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 CD84Q9UIB8 345 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 RAB26Q9ULW5 256 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 PLXNB2O15031 1838 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 LOC285556D6RIA3 1793 aa2.76□□□□□ -1.97
SMC4-224ENST00000494612 MTCL1Q9Y4B5 1905 aaKnown RBP2.76□□□□□ -1.97
SMC4-224ENST00000494612 PHIPQ8WWQ0 1821 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 MROH5Q6ZUA9 1318 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 DOCK3Q8IZD9 2030 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 XIRP2A4UGR9 3374 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 A0A075B6Q4 140 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 A0A0B4J2A0 478 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 SERPINA5P05154 406 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 CRYGBP07316 175 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms