RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CD14P08571 375 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 TGFBR2P37173 567 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 PLP2Q04941 152 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 RAB40BQ12829 278 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 TBC1D28Q2M2D7 210 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 KLHL22Q53GT1 634 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 AADACL4Q5VUY2 407 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 NXNL2Q5VZ03 156 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 IGFN1Q86VF2 1251 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 GID4Q8IVV7 300 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 ARIH2OSQ8N7S6 290 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 RBP7Q96R05 134 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 GPX7Q96SL4 187 aaPredicted RBP11.34□□□□□ -0.59
ERCC3-209ENST00000494464 KCNN2Q9H2S1 579 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 RNF121Q9H920 327 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 CDH20Q9HBT6 801 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 FGF20Q9NP95 211 aaPredicted RBP11.34□□□□□ -0.59
ERCC3-209ENST00000494464 YLPM1P49750 1951 aaKnown RBP11.34□□□□□ -0.59
ERCC3-209ENST00000494464 ABCA1O95477 2261 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 IQCMA0A1B0GVH7 501 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 SLC22A1O15245 554 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 ZNF32P17041 273 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 USF1P22415 310 aaPredicted RBP11.33□□□□□ -0.6
ERCC3-209ENST00000494464 SLC6A6P31641 620 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 CDAP32320 146 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 NR4A2P43354 598 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 TMED1Q13445 227 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 CTF1Q16619 201 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 TIGD6Q17RP2 521 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 FAM122BQ7Z309 247 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 LRRC18Q8N456 261 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 OR1J2Q8NGS2 313 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 NSMAFQ92636 917 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 MS4A5Q9H3V2 200 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 CMC2Q9NRP2 79 aa11.33□□□□□ -0.6
ERCC3-209ENST00000494464 CRLF1O75462 422 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 NDUFB2O95178 105 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 ADRA2AP08913 450 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 CST2P09228 141 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 GIFP27352 417 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 HTR1FP30939 366 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 APLNRP35414 380 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 RPL4P36578 427 aaKnown RBP11.32□□□□□ -0.6
ERCC3-209ENST00000494464 ERVK-25P63136 954 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 HSF2Q03933 536 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 MESTQ5EB52 335 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 PABPC1L2AQ5JQF8 200 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 RGS7BPQ6MZT1 257 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-209ENST00000494464 BCDIN3DQ7Z5W3 292 aaKnown RBP11.32□□□□□ -0.6
ERCC3-209ENST00000494464 PAQR4Q8N4S7 273 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-209ENST00000494464 PROKR2Q8NFJ6 384 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 LGALS12Q96DT0 336 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 JAM3Q9BX67 310 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 BCL2L14Q9BZR8 327 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 GRHPRQ9UBQ7 328 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 ERGIC3Q9Y282 383 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 LSM2Q9Y333 95 aaKnown RBP11.32□□□□□ -0.6
ERCC3-209ENST00000494464 ADAM18Q9Y3Q7 739 aa11.32□□□□□ -0.6
ERCC3-209ENST00000494464 IGLV3-9A0A075B6K5 115 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 A0A1W2PPW3 197 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 XKRYO14609 159 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 FAM157BP0CG42 384 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 DAOP14920 347 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 ZNF250P15622 560 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 CD36P16671 472 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 APEX1P27695 318 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 LAP3P28838 519 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 SDHAP31040 664 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 GUCA1AP43080 201 aaPredicted RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 MTNR1AP48039 350 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 KRR1Q13601 381 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 SGCAQ16586 387 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 GPR139Q6DWJ6 353 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 CXXC5Q7LFL8 322 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 SYT9Q86SS6 491 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 ZCCHC24Q8N2G6 241 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 CPEB3Q8NE35 698 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 RNFT2Q96EX2 444 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 Q96M85 177 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 SYT3Q9BQG1 590 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 WACQ9BTA9 647 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 IFT27Q9BW83 186 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 BPESC1Q9GZL8 116 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 NRIP3Q9NQ35 241 aa11.31□□□□□ -0.6
ERCC3-209ENST00000494464 HINT3Q9NQE9 182 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 MYEF2Q9P2K5 600 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 EXOGQ9Y2C4 368 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 EXOSC1Q9Y3B2 195 aaKnown RBP11.31□□□□□ -0.6
ERCC3-209ENST00000494464 A0A1W2PPL8 197 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 PRSS37A4D1T9 235 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 RIIAD1A6NNX1 92 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 A8MV72 311 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-209ENST00000494464 H7C1C5 153 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 MYL12BO14950 172 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 ICMTO60725 284 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 IFNGP01579 166 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms