RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-217	ENST00000492883	UBE2F	Q969M7	185 aa		11.97	□□□□□ -0.49
CCM2-217	ENST00000492883		Q96MF0	132 aa		11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	ZNF582	Q96NG8	517 aa	Predicted RBP	11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	CNN2	Q99439	309 aa	Known RBP	11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	YIPF3	Q9GZM5	350 aa		11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	TPK1	Q9H3S4	243 aa		11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	FAM118A	Q9NWS6	357 aa		11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	SMPD3	Q9NY59	655 aa	Predicted RBP	11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	PTTG3P	Q9NZH4	202 aa		11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	N6AMT1	Q9Y5N5	214 aa		11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	DCHS2	Q6V1P9	2916 aa		11.97	□□□□□ -0.49
CCM2-217	ENST00000492883	APC	P25054	2843 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	PLSCR5	A0PG75	271 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883		H3BSA7	217 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	TIMM8A	O60220	97 aa	Predicted RBP	11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	ALOX5AP	P20292	161 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	PEX2	P28328	305 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	HTR1F	P30939	366 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	ATP6V1E1	P36543	226 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	MALL	Q13021	153 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	PSG7	Q13046	419 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	RHOU	Q7L0Q8	258 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	TGIF2LY	Q8IUE0	185 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	KRTAP1-3	Q8IUG1	177 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	PACRGL	Q8N7B6	248 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	RNF133	Q8WVZ7	376 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	NEU4	Q8WWR8	484 aa	Predicted RBP	11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	RFK	Q969G6	155 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	HAVCR1	Q96D42	359 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	RDH12	Q96NR8	316 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	AMELY	Q99218	206 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	C1QTNF5	Q9BXJ0	243 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	POFUT1	Q9H488	388 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	HAO2	Q9NYQ3	351 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	DNAJC27	Q9NZQ0	273 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	WARS2	Q9UGM6	360 aa	Known RBP	11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	TMEM14A	Q9Y6G1	99 aa		11.96	□□□□□ -0.49
CCM2-217	ENST00000492883	NOTCH2	Q04721	2471 aa		11.96	□□□□□ -0.5
CCM2-217	ENST00000492883	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.96	□□□□□ -0.5
CCM2-217	ENST00000492883		E9PQ18	207 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	LY6H	O94772	140 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	APOC1	P02654	83 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	ANXA2	P07355	339 aa	Known RBP	11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	SLC2A1	P11166	492 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	RAC2	P15153	192 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	LIPA	P38571	399 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	CX3CR1	P49238	355 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	SNRPG	P62308	76 aa	Known RBP	11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	POU4F2	Q12837	409 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	GGTLC2	Q14390	218 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	HLX	Q14774	488 aa	Predicted RBP	11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	MEDAG	Q5VYS4	303 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	KCTD18	Q6PI47	426 aa	Predicted RBP	11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	COLCA1	Q6ZS62	124 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	KRT77	Q7Z794	578 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	SLC35F2	Q8IXU6	374 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	OR51G2	Q8NGK0	314 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	ADGRL4	Q9HBW9	690 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	CYSLTR2	Q9NS75	346 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	PURG	Q9UJV8	347 aa	Known RBP	11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	KLHDC2	Q9Y2U9	406 aa		11.95	□□□□□ -0.5
CCM2-217	ENST00000492883	ABCA12	Q86UK0	2595 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	SNTN	A6NMZ2	147 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	C17orf100	A8MU93	164 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	CASQ2	O14958	399 aa	Predicted RBP	11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	SLC16A6	O15403	523 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	MPZL2	O60487	215 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	SBK2	P0C263	348 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	OTX1	P32242	354 aa	Predicted RBP	11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	OPRL1	P41146	370 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	ZNF81	P51508	661 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	DSCR9	P59020	149 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	SLC34A1	Q06495	639 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	TMED1	Q13445	227 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	CARTPT	Q16568	116 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	CLEC2A	Q6UVW9	174 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	LRRN1	Q6UXK5	716 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	FBXW12	Q6X9E4	464 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	ZNF525	Q8N782	197 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	ASB17	Q8WXJ9	295 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	MNT	Q99583	582 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	APOL4	Q9BPW4	351 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	RHNO1	Q9BSD3	238 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	MRO	Q9BYG7	248 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	VCX	Q9H320	206 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	SP140L	Q9H930	580 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	BRD7	Q9NPI1	651 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	CLN6	Q9NWW5	311 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	CAD	P27708	2225 aa		11.94	□□□□□ -0.5
CCM2-217	ENST00000492883	CENPE	Q02224	2701 aa		11.93	□□□□□ -0.5
CCM2-217	ENST00000492883	TRIM64	A6NGJ6	449 aa		11.93	□□□□□ -0.5
CCM2-217	ENST00000492883	TRIM64B	A6NI03	449 aa		11.93	□□□□□ -0.5
CCM2-217	ENST00000492883	ZNF670-ZNF695	F2Z2N8	137 aa		11.93	□□□□□ -0.5
CCM2-217	ENST00000492883	PSMD9	O00233	223 aa		11.93	□□□□□ -0.5
CCM2-217	ENST00000492883	DLGAP1	O14490	977 aa		11.93	□□□□□ -0.5

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