RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MIOXQ9UGB7 285 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 INSIG2Q9Y5U4 225 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 IGLV1-36A0A0B4J1U3 117 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 IQCF6A8MYZ5 107 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 SNX3O60493 162 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 DIRAS1O95057 198 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 PPP1R3DO95685 299 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 FSHBP01225 129 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 HLA-DQA2P01906 255 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 DBHP09172 617 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 WNT2P09544 360 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 ZNF823P16415 610 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 ZNF12P17014 697 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 MNAT1P51948 309 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 TPTEP56180 551 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 FXYD6P3P58550 94 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 TSPAN31Q12999 210 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 HLXQ14774 488 aaPredicted RBP10.48□□□□□ -0.73
COL6A1-205ENST00000492851 ZMYND11Q15326 602 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 OR2T2Q6IF00 324 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 BTNL3Q6UXE8 466 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 LRRN1Q6UXK5 716 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 COLCA1Q6ZS62 124 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 NLRC3Q7RTR2 1065 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 PGAM4Q8N0Y7 254 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 OR5AS1Q8N127 324 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 RNF148Q8N7C7 305 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 DEFB108BQ8NET1 73 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 SLC26A10Q8NG04 563 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 SPTSSAQ969W0 71 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 MEGF10Q96KG7 1140 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 TSSK2Q96PF2 358 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 NMNAT3Q96T66 252 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 SLC6A7Q99884 636 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 ATF6BQ99941 703 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 C1QTNF5Q9BXJ0 243 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 LHFPL6Q9Y693 200 aa10.48□□□□□ -0.73
COL6A1-205ENST00000492851 A0A1B0GWJ7 208 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 F5H0A9 414 aaPredicted RBP10.47□□□□□ -0.73
COL6A1-205ENST00000492851 F5H5K5 113 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 DCTN6O00399 190 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 RGS9O75916 674 aaPredicted RBP10.47□□□□□ -0.73
COL6A1-205ENST00000492851 SEMG1P04279 462 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 HIST1H1CP16403 213 aaKnown RBP10.47□□□□□ -0.73
COL6A1-205ENST00000492851 RRM2P31350 389 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 GATA4P43694 442 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 GSSP48637 474 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 MMP16P51512 607 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 HMGA2P52926 109 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 RAD23AP54725 363 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 FOXL1Q12952 345 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 KCNJ8Q15842 424 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 SLC18B1Q6NT16 456 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 C16orf89Q6UX73 402 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 ZNF771Q7L3S4 317 aaPredicted RBP10.47□□□□□ -0.73
COL6A1-205ENST00000492851 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.47□□□□□ -0.73
COL6A1-205ENST00000492851 OR52L1Q8NGH7 329 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 OR11L1Q8NGX0 322 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 OR4K13Q8NH42 304 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 DVL3Q92997 716 aaPredicted RBP10.47□□□□□ -0.73
COL6A1-205ENST00000492851 CDRT15Q96T59 188 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 SSBP3Q9BWW4 388 aaPredicted RBP10.47□□□□□ -0.73
COL6A1-205ENST00000492851 TMEM165Q9HC07 324 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 RPRD1BQ9NQG5 326 aaKnown RBP10.47□□□□□ -0.73
COL6A1-205ENST00000492851 MMP26Q9NRE1 261 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 CD300AQ9UGN4 299 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 CYB5R1Q9UHQ9 305 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 PPIAL4AQ9Y536 164 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 ANK2Q01484 3957 aa10.47□□□□□ -0.73
COL6A1-205ENST00000492851 CEACAM18A8MTB9 384 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 TRAPPC2LH3BP13 241 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 DCTN3O75935 186 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 LCATP04180 440 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 ACSM4P0C7M7 580 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 RPS2P15880 293 aaKnown RBP10.46□□□□□ -0.73
COL6A1-205ENST00000492851 MTNR1AP48039 350 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 GNB2P62879 340 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 PAX8Q06710 450 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 MZT1Q08AG7 82 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 MEP1BQ16820 701 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 KRTAP27-1Q3LI81 207 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 CORO6Q6QEF8 472 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 PGAP1Q75T13 922 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 DOK3Q7L591 496 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 FAM86B1Q8N7N1 296 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 ZDHHC22Q8N966 263 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 PLPP7Q8NBV4 271 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 OR10AD1Q8NGE0 317 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 OR52E2Q8NGJ4 325 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 OR4C15Q8NGM1 316 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 OR2T4Q8NH00 348 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 SPRYD4Q8WW59 207 aaPredicted RBP10.46□□□□□ -0.73
COL6A1-205ENST00000492851 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.73
COL6A1-205ENST00000492851 TRIM15Q9C019 465 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 MS4A7Q9GZW8 240 aaPredicted RBP10.46□□□□□ -0.73
COL6A1-205ENST00000492851 FAM107BQ9H098 131 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 TRIM36Q9NQ86 728 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 DCAF16Q9NXF7 216 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 TAGLN3Q9UI15 199 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms