RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SCRN3Q0VDG4 424 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 MPPED2Q15777 294 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 MESTQ5EB52 335 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 INTS11Q5TA45 600 aaKnown RBP10.93□□□□□ -0.66
USF1-206ENST00000491629 NLRC3Q7RTR2 1065 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 LDLRAD3Q86YD5 345 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 PCYOX1LQ8NBM8 494 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 OR51A7Q8NH64 312 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 FNDC8Q8TC99 324 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 Q8TCH9 128 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 SLC26A7Q8TE54 656 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 TLCD1Q96CP7 247 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 WDFY2Q96P53 400 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 WACQ9BTA9 647 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 C16orf95Q9H693 158 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 WDR76Q9H967 626 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 ACOXLQ9NUZ1 547 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 A4GNTQ9UNA3 340 aa10.93□□□□□ -0.66
USF1-206ENST00000491629 IGHV1-69DA0A0B4J2H0 117 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 RER1O15258 196 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 FAM20BO75063 409 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 IGHV1-69P01742 117 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 GUCA1AP43080 201 aaPredicted RBP10.92□□□□□ -0.66
USF1-206ENST00000491629 AQP6Q13520 282 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 SAMD5Q5TGI4 173 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 PRAMEF6Q5VXH4 476 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 CALHM3Q86XJ0 350 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 OR13C2Q8NGS9 318 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 OR1F12Q8NHA8 337 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 TBC1D15Q8TC07 691 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 GATAD2BQ8WXI9 593 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 LHX4Q969G2 390 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 Q96M85 177 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 ZNF582Q96NG8 517 aaPredicted RBP10.92□□□□□ -0.66
USF1-206ENST00000491629 POLR2J2Q9GZM3 115 aaKnown RBP10.92□□□□□ -0.66
USF1-206ENST00000491629 POLR2J3Q9H1A7 115 aaKnown RBP10.92□□□□□ -0.66
USF1-206ENST00000491629 SEMA6AQ9H2E6 1030 aa10.92□□□□□ -0.66
USF1-206ENST00000491629 TEX13CA0A0J9YWL9 993 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 A6NIZ1 184 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 CDC42EP2O14613 210 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 ANOS1P23352 680 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 RAP1BP61224 184 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 RAP1AP62834 184 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 DBPQ10586 325 aaPredicted RBP10.91□□□□□ -0.66
USF1-206ENST00000491629 COX10Q12887 443 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 TTMPQ5BVD1 217 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 RABL3Q5HYI8 236 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 FAM122BQ7Z309 247 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 NRMQ8IXM6 262 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 PDZD9Q8IXQ8 264 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 C1orf87Q8N0U7 546 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 FGFRL1Q8N441 504 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 RASSF5Q8WWW0 418 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 RASD2Q96D21 266 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 MAGEB18Q96M61 343 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 COG8Q96MW5 612 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 UFSP2Q9NUQ7 469 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 NKIRAS1Q9NYS0 192 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 NDUFAF1Q9Y375 327 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 SNX13Q9Y5W8 968 aa10.91□□□□□ -0.66
USF1-206ENST00000491629 C5orf63A6NC05 138 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 LRRC30A6NM36 301 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 C3orf80F5H4A9 247 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 J3QW42 95 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 FFAR1O14842 300 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 TSPAN9O75954 239 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 FPR3P25089 353 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 CD200P41217 278 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 ARF6P62330 175 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 HIST1H3AP68431 136 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 PRKCDQ05655 676 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 C2orf68Q2NKX9 166 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 HIST2H3PS2Q5TEC6 136 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 SFRP4Q6FHJ7 346 aaPredicted RBP10.9□□□□□ -0.66
USF1-206ENST00000491629 NANOGP8Q6NSW7 305 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 COLCA1Q6ZS62 124 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 HIST2H3AQ71DI3 136 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 APOBEC3DQ96AK3 386 aaPredicted RBP10.9□□□□□ -0.66
USF1-206ENST00000491629 TECTBQ96PL2 329 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 TRIM15Q9C019 465 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 BATF3Q9NR55 127 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 RHCGQ9UBD6 479 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 BAG5Q9UL15 447 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 COA3Q9Y2R0 106 aaPredicted RBP10.9□□□□□ -0.66
USF1-206ENST00000491629 LHFPL6Q9Y693 200 aa10.9□□□□□ -0.66
USF1-206ENST00000491629 ZNF816-ZNF321PA0A0X1KG74 233 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 PRSS37A4D1T9 235 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 J3KTA2 159 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 FXYD1O00168 92 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 CSF1P09603 554 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 RGS6P49758 472 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 NPY4RP50391 375 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 LSM6P62312 80 aaKnown RBP10.89□□□□□ -0.67
USF1-206ENST00000491629 ELF3P78545 371 aaPredicted RBP10.89□□□□□ -0.67
USF1-206ENST00000491629 PRB3Q04118 309 aaPredicted RBP10.89□□□□□ -0.67
USF1-206ENST00000491629 EGR3Q06889 387 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 NFYCQ13952 458 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 MEP1BQ16820 701 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 KRTAP27-1Q3LI81 207 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms