RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DUX4L7P0CJ90 424 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DARSP14868 501 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 WARSP23381 471 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 MYL9P24844 172 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CD79BP40259 229 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 RPS9P46781 194 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PSME3P61289 254 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 MS4A2Q01362 244 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF91Q05481 1191 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PDK2Q15119 407 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 GRK1Q15835 563 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 NXNL2Q5VZ03 156 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PRSS48Q7RTY5 328 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TGIF2LXQ8IUE1 241 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 KIR3DL3Q8N743 410 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 YIPF7Q8N8F6 280 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 GDPD1Q8N9F7 314 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF555Q8NEP9 628 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 KBTBD8Q8NFY9 601 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 OR10G7Q8NGN6 311 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF564Q8TBZ8 553 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 BTN2A3PQ96KV6 586 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 HYLS1Q96M11 299 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 NODALQ96S42 347 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TCEAL7Q9BRU2 100 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CCDC32Q9BV29 185 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SLC22A4Q9H015 551 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 OPN3Q9H1Y3 402 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DCSTAMPQ9H295 470 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SPNS1Q9H2V7 528 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 NMUR1Q9HB89 426 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 MCUBQ9NWR8 336 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 USE1Q9NZ43 259 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DUX4Q9UBX2 424 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SLC17A4Q9Y2C5 497 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF337Q9Y3M9 751 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 FKBP7Q9Y680 259 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ATG2AQ2TAZ0 1938 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 IGHV4OR15-8A0A075B7B6 117 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 IGHV3OR16-12A0A075B7B8 117 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 IGLV5-45A0A087WSX0 123 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ABCD4O14678 606 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 EI24O14681 340 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 LYPLA1O75608 230 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 UGT2B17O75795 530 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SRP72O76094 671 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 AP2A1O95782 977 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TBX6O95947 436 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 MBP02144 154 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TNNC2P02585 160 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 C2P06681 752 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 STAG3L2P0CL84 134 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF30P17039 623 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TBPP20226 339 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PSMB5P28074 263 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ATP4BP51164 291 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 GABARAPL2P60520 117 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SPCS3P61009 180 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ERVK-25P63136 954 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PRKCDQ05655 676 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 STX4Q12846 297 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TRAM2Q15035 370 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SIX1Q15475 284 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TAF13Q15543 124 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PRR4Q16378 134 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 IMPG1Q17R60 797 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 LRRC37A5PQ49AS3 106 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 RFTN2Q52LD8 501 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CLLU1Q5K131 121 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CDKL4Q5MAI5 379 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SAMD4BQ5PRF9 694 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ATP1A1-AS1Q5TC04 95 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PRMT9Q6P2P2 845 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF549Q6P9A3 640 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PLET1Q6UQ28 207 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF852Q6ZMS4 543 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 FAM92BQ6ZTR7 304 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DPPA2Q7Z7J5 298 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TMEM135Q86UB9 458 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DHFR2Q86XF0 187 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 BLIDQ8IZY5 108 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 OR1M1Q8NGA1 313 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 OR4M2Q8NGB6 313 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 OR2AP1Q8NGE2 309 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DYNC2LI1Q8TCX1 351 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DCAKDQ8WVC6 231 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 RNF185Q96GF1 192 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CENPNQ96H22 339 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF419Q96HQ0 510 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SERAC1Q96JX3 654 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TRNT1Q96Q11 434 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 OR52B2Q96RD2 323 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 QTRT1Q9BXR0 403 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CWH43Q9H720 699 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 COA4Q9NYJ1 87 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 AHSPQ9NZD4 102 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SCML1Q9UN30 329 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PDE10AQ9Y233 779 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ASB4Q9Y574 426 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PCDHGB1Q9Y5G3 927 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms