RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ZFP62Q8NB50 900 aaPredicted RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 OR2M7Q8NG81 312 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 OR6M1Q8NGM8 313 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 OR13C3Q8NGS6 347 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 C11orf40Q8WZ69 217 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 PSMF1Q92530 271 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CREB3L1Q96BA8 519 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 ZNF524Q96C55 264 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 HAVCR1Q96D42 359 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 SLAMF6Q96DU3 332 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 MAP6Q96JE9 813 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 TECTBQ96PL2 329 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 SORCS2Q96PQ0 1159 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 NUDT16L1Q9BRJ7 211 aaKnown RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CCDC86Q9H6F5 360 aaKnown RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 SEC61A2Q9H9S3 476 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 PROK2Q9HC23 129 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 MOV10Q9HCE1 1003 aaKnown RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 TMEM138Q9NPI0 162 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CENPMQ9NSP4 180 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 DDX28Q9NUL7 540 aaKnown RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 MED29Q9NX70 200 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 ETAA1Q9NY74 926 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 GHRLQ9UBU3 117 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 ZNF107Q9UII5 783 aaPredicted RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 ZNF175Q9Y473 711 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 LRP12Q9Y561 859 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 HEATR5AQ86XA9 2040 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CFAP46Q8IYW2 2715 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 TRAV17A0A0B4J275 112 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 A0A0J9YW62 118 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 A0A0U1RQV5 110 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 LOC100289279A0A1B0GTE1 492 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 FAM240BA0A1B0GVZ2 78 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 LOC390937A0A1W2PQ73 354 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 GABARAPH6UMI1 98 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 EIF1AYO14602 144 aaKnown RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 LYRM1O43325 122 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 SYT7O43581 403 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 HPGDSO60760 199 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 MRPL33O75394 65 aaKnown RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 C1QL1O75973 258 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 KRT33AO76009 404 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 NEURL1O76050 574 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 DHFRP00374 187 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ALDOBP05062 364 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 CELA2AP08217 269 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 CD37P11049 281 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ZNF20P17024 532 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ELK1P19419 428 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 RAB6AP20340 208 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 GNALP38405 381 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 HCCSP53701 268 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 GFRA1P56159 465 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 TPTEP56180 551 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 FOXL2P58012 376 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 NANOS3P60323 173 aaKnown RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ACTBP60709 375 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 RPS18P62269 152 aaKnown RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ACTG1P63261 375 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 Q0VFX4 171 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 FOXO1Q12778 655 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 CAMK2DQ13557 499 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 RTP5Q14D33 572 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 RAB35Q15286 201 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 RAB11BQ15907 218 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 EIF2S3LQ2VIR3 472 aaKnown RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 WDR38Q5JTN6 314 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 CEP78Q5JTW2 689 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ABLIM2Q6H8Q1 611 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 OR7E24Q6IFN5 339 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 CCBE1Q6UXH8 406 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 FCRLAQ7L513 359 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 LINGO2Q7L985 606 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 TMEM123Q8N131 208 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 TOMM5Q8N4H5 51 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ZNF433Q8N7K0 673 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 PNLDC1Q8NA58 520 aaKnown RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 DUSP18Q8NEJ0 188 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 OR10D3Q8NH80 312 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 SMIM4Q8WVI0 70 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 FCAMRQ8WWV6 532 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 PP6455Q8WZ26 134 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 TXNDC15Q96J42 360 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 OR2M2Q96R28 347 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 DCLRE1CQ96SD1 692 aaKnown RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 THAP7Q9BT49 309 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 PRRG4Q9BZD6 226 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 OR10A2Q9H208 303 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 MIXL1Q9H2W2 232 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 TMEM185BQ9H7F4 350 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ZNF703Q9H7S9 590 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 PLEKHA1Q9HB21 404 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 SCPEP1Q9HB40 452 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 FOXD3Q9UJU5 478 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-208ENST00000489537 ITGB1BP2Q9UKP3 347 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 FBXL3Q9UKT7 428 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 GTF2A1LQ9UNN4 478 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 SLC22A13Q9Y226 551 aa5.63□□□□□ -1.51
SF3A3-208ENST00000489537 EMC9Q9Y3B6 208 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms