RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ACSM5Q6NUN0 579 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 ARHGAP24Q8N264 748 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 ATG16L2Q8NAA4 619 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 SLC37A3Q8NCC5 494 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 OR2T29Q8NH02 315 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 APOBEC3DQ96AK3 386 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-206ENST00000489142 RAB39BQ96DA2 213 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 MAP6Q96JE9 813 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 LRGUKQ96M69 825 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 OR2V2Q96R30 315 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 DIRC2Q96SL1 478 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 ATF6BQ99941 703 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 THTPAQ9BU02 230 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
VTI1A-206ENST00000489142 MUC13Q9H3R2 512 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 REEP1Q9H902 201 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 PNRC2Q9NPJ4 139 aaKnown RBP11.84□□□□□ -0.51
VTI1A-206ENST00000489142 TMEM106BQ9NUM4 274 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 IL20Q9NYY1 176 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 CYB5R1Q9UHQ9 305 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 ATPIF1Q9UII2 106 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 PRPF19Q9UMS4 504 aaKnown RBP11.84□□□□□ -0.51
VTI1A-206ENST00000489142 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 ZNF205O95201 554 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 IGHV2-70P01814 119 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 CLUP10909 449 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 ZNF823P16415 610 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 SELEP16581 610 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 PCMT1P22061 227 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 TUBG1P23258 451 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 TNFSF4P23510 183 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 RGS6P49758 472 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 LCN2P80188 198 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 CRMP1Q14194 572 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 MICAQ29983 383 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 KRTAP27-1Q3LI81 207 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 SLC36A3Q495N2 470 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 ZNF362Q5T0B9 420 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-206ENST00000489142 RPL13AP3Q6NVV1 102 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 SHQ1Q6PI26 577 aaKnown RBP11.83□□□□□ -0.52
VTI1A-206ENST00000489142 FBXW12Q6X9E4 464 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 C1orf229Q6ZS94 237 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-206ENST00000489142 RASSF6Q6ZTQ3 369 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 PEG10Q86TG7 708 aaKnown RBP11.83□□□□□ -0.52
VTI1A-206ENST00000489142 LINC00471Q8N535 108 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 IQCF1Q8N6M8 205 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 OR10G2Q8NGC3 310 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 OR5L1Q8NGL2 311 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 OR10S1Q8NGN2 331 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 ZNF420Q8TAQ5 688 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-206ENST00000489142 ASB9Q96DX5 294 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 COG8Q96MW5 612 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 DDOQ99489 341 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 NIPSNAP1Q9BPW8 284 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 C19orf24Q9BVV8 132 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 G6PC2Q9NQR9 355 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 TUBG2Q9NRH3 451 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 NPTNQ9Y639 398 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 STAB1Q9NY15 2570 aa11.83□□□□□ -0.52
VTI1A-206ENST00000489142 TRAV20A0A0B4J274 112 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 C5orf63A6NC05 138 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 F5H5P2 479 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 ACOT8O14734 319 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 MLNRO43193 412 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 PNPP00491 289 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 LCATP04180 440 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 HLA-DPB1P04440 258 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 SPARCP09486 303 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 RAP2AP10114 183 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 ADRA2CP18825 462 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 SEC61A1P61619 476 aaKnown RBP11.82□□□□□ -0.52
VTI1A-206ENST00000489142 SLC3A1Q07837 685 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 SPATC1Q76KD6 591 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 TMEM179BQ7Z7N9 219 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 ADGRG5Q8IZF4 528 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 ZNF283Q8N7M2 679 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 ZNF511Q8NB15 262 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 OR8G5Q8NG78 346 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 OR2T4Q8NH00 348 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 SIGLEC11Q96RL6 698 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 RBM4Q9BWF3 364 aaKnown RBP11.82□□□□□ -0.52
VTI1A-206ENST00000489142 C1QTNF5Q9BXJ0 243 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 MED20Q9H944 212 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 IL19Q9UHD0 177 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 PPP1R3CQ9UQK1 317 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 COMMD3-BMI1R4GMX3 469 aa11.82□□□□□ -0.52
VTI1A-206ENST00000489142 J3QW42 95 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 CYB5R3P00387 301 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-206ENST00000489142 CST1P01037 141 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 ANPEPP15144 967 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 TNFRSF1AP19438 455 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 ZFP36P26651 326 aaKnown RBP11.81□□□□□ -0.52
VTI1A-206ENST00000489142 THBS2P35442 1172 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 SLC6A9P48067 706 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 MMP16P51512 607 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 GK2Q14410 553 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-206ENST00000489142 ZMYND11Q15326 602 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 SNAI3Q3KNW1 292 aa11.81□□□□□ -0.52
VTI1A-206ENST00000489142 DCAF12L2Q5VW00 463 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms