RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 AVL9Q8NBF6 648 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 OR5AP2Q8NGF4 316 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 MRGPRFQ96AM1 343 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 METTL21EPA6NDL7 271 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 GPR37O15354 613 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 DEFA6Q01524 100 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 EIF2B1Q14232 305 aaKnown RBP17.47■□□□□ 0.39
HMG20B-213ENST00000488973 ACKR1Q16570 336 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 SGCBQ16585 318 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 C10orf91Q5T1B1 145 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 NKAIN3Q8N8D7 197 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 BOLLQ8N9W6 283 aaKnown RBP17.47■□□□□ 0.39
HMG20B-213ENST00000488973 OR13C3Q8NGS6 347 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 FOXRED1Q96CU9 486 aaPredicted RBP17.47■□□□□ 0.39
HMG20B-213ENST00000488973 MRPL38Q96DV4 380 aaKnown RBP17.47■□□□□ 0.39
HMG20B-213ENST00000488973 CPED1A4D0V7 1026 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 FITM1A5D6W6 292 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 NUDT19A8MXV4 375 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 F8VVB4 439 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 F8VWA3 439 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 UBE2CO00762 179 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 SRSF10O75494 262 aaKnown RBP17.47■□□□□ 0.39
HMG20B-213ENST00000488973 MT-ATP6P00846 226 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 ISG15P05161 165 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 SPOCK1Q08629 439 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 ZNF260Q3ZCT1 412 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 OR10K2Q6IF99 312 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 FJX1Q86VR8 437 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 LYPD6Q86Y78 171 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 FAM160A2Q8N612 972 aaPredicted RBP17.47■□□□□ 0.39
HMG20B-213ENST00000488973 PIK3IP1Q96FE7 263 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 IGFLR1Q9H665 355 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 GDF2Q9UK05 429 aaPredicted RBP17.47■□□□□ 0.39
HMG20B-213ENST00000488973 RAB22AQ9UL26 194 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 TMED7Q9Y3B3 224 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 R4GMQ9 66 aa17.47■□□□□ 0.39
HMG20B-213ENST00000488973 ADCYAP1P18509 176 aa17.46■□□□□ 0.39
HMG20B-213ENST00000488973 ECH1Q13011 328 aa17.46■□□□□ 0.39
HMG20B-213ENST00000488973 DHRS7BQ6IAN0 325 aaPredicted RBP17.46■□□□□ 0.39
HMG20B-213ENST00000488973 RBMS3Q6XE24 437 aaKnown RBP17.46■□□□□ 0.39
HMG20B-213ENST00000488973 GTPBP8Q8N3Z3 284 aaPredicted RBP17.46■□□□□ 0.39
HMG20B-213ENST00000488973 OR52N5Q8NH56 324 aa17.46■□□□□ 0.39
HMG20B-213ENST00000488973 NXF5Q9H1B4 397 aaKnown RBP17.46■□□□□ 0.39
HMG20B-213ENST00000488973 TXNIPQ9H3M7 391 aa17.46■□□□□ 0.39
HMG20B-213ENST00000488973 TMEM100Q9NV29 134 aa17.46■□□□□ 0.39
HMG20B-213ENST00000488973 C17orf105B2RV13 164 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 PLGP00747 810 aaPredicted RBP17.46■□□□□ 0.38
HMG20B-213ENST00000488973 AVPR2P30518 371 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 PTGFRP43088 359 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 ZNF117Q03924 483 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 GUCA2BQ16661 112 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 COL13A1Q5TAT6 717 aaPredicted RBP17.46■□□□□ 0.38
HMG20B-213ENST00000488973 C1QL3Q5VWW1 255 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 Q6ZSR6 202 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 FRMD1Q8N878 549 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 WDSUB1Q8N9V3 476 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 ACBD4Q8NC06 268 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 ZNF629Q9UEG4 869 aaPredicted RBP17.46■□□□□ 0.38
HMG20B-213ENST00000488973 CARHSP1Q9Y2V2 147 aaKnown RBP17.46■□□□□ 0.38
HMG20B-213ENST00000488973 RHBDD3Q9Y3P4 386 aa17.46■□□□□ 0.38
HMG20B-213ENST00000488973 RAB27BO00194 218 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 ZNF208O43345 1280 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 FADS1O60427 444 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 STK17BO94768 372 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 CD79AP11912 226 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 TPT1P13693 172 aaKnown RBP17.45■□□□□ 0.38
HMG20B-213ENST00000488973 CTLA4P16410 223 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 SLC37A1P57057 533 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 TAS2R60P59551 318 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 NAAAQ02083 359 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 OR2B11Q5JQS5 317 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 UNQ6126/PRO20091Q6UXV3 157 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 CHRDL2Q6WN34 429 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 MDGA2Q7Z553 956 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 TRAPPC6BQ86SZ2 158 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 SLC30A7Q8NEW0 376 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 TEX13DA0A0J9YY54 714 aaPredicted RBP17.45■□□□□ 0.38
HMG20B-213ENST00000488973 A0A1B0GV90 55 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 DUS4LO95620 317 aaKnown RBP17.45■□□□□ 0.38
HMG20B-213ENST00000488973 CRHP06850 196 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 PSMB6P28072 239 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 AKT2P31751 481 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 RAB4BP61018 213 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 DCDP81605 110 aaKnown RBP17.45■□□□□ 0.38
HMG20B-213ENST00000488973 TMEM88Q6PEY1 159 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 SSX9Q7RTT3 188 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 SKA3Q8IX90 412 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 SPAG16Q8N0X2 631 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 OR4K17Q8NGC6 315 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 OR4D6Q8NGJ1 314 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 C2CD4CQ8TF44 421 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 ARL11Q969Q4 196 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 CPNE4Q96A23 557 aaPredicted RBP17.45■□□□□ 0.38
HMG20B-213ENST00000488973 SLC46A1Q96NT5 459 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 PFDN5Q99471 154 aa17.45■□□□□ 0.38
HMG20B-213ENST00000488973 TCEAL2Q9H3H9 227 aaPredicted RBP17.45■□□□□ 0.38
HMG20B-213ENST00000488973 TRBV6-7A0A0A0MS04 114 aa17.44■□□□□ 0.38
HMG20B-213ENST00000488973 WIPF3A6NGB9 483 aa17.44■□□□□ 0.38
HMG20B-213ENST00000488973 KLF8O95600 359 aaPredicted RBP17.44■□□□□ 0.38
HMG20B-213ENST00000488973 PNLIPRP3Q17RR3 467 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms