RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 HIST1H3AP68431 136 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 IL13RA1P78552 427 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 SLC9A3R2Q15599 337 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 MEP1BQ16820 701 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 ZNF181Q2M3W8 571 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 ZNF404Q494X3 552 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 HIST2H3PS2Q5TEC6 136 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 LEG1Q6P5S2 330 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 DNM1P34Q6PK57 102 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 DPY19L2P2Q6ZN68 376 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 HIST2H3AQ71DI3 136 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-231ENST00000488905 MOGAT3Q86VF5 341 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 GJC3Q8NFK1 279 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 NEIL1Q96FI4 390 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-231ENST00000488905 TSSK2Q96PF2 358 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 HOPXQ9BPY8 73 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-231ENST00000488905 TMEM246Q9BRR3 403 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 IGHV3-64DA0A0J9YX35 117 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 LRRC30A6NM36 301 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 DCTN6O00399 190 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 FSTL3O95633 263 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 NCK1P16333 377 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 CRABP1P29762 137 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 CDKN2AP42771 156 aaKnown RBP15.4■□□□□ 0.06
HDAC6-231ENST00000488905 CORO6Q6QEF8 472 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 C1orf87Q8N0U7 546 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 RAB40AQ8WXH6 277 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 PLEKHA8Q96JA3 519 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 KCTD14Q9BQ13 255 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-231ENST00000488905 WDR76Q9H967 626 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 KRCC1Q9NPI7 259 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-231ENST00000488905 NDUFAF4Q9P032 175 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 RPS6KA6Q9UK32 745 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 AURKCQ9UQB9 309 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 TGP01266 2768 aa15.4■□□□□ 0.06
HDAC6-231ENST00000488905 IGLV1-36A0A0B4J1U3 117 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 TRBV4-1A0A0J9YWV2 114 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 A0A1B0GWJ7 208 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 UNC119BA6NIH7 251 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 RHCEP18577 417 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 PITPNBP48739 271 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 CENPAP49450 140 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 NUDT2P50583 147 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 COX10Q12887 443 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 SEC23BQ15437 767 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 SMARCD3Q6STE5 483 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 NLRC3Q7RTR2 1065 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 JAZF1Q86VZ6 243 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 OR8B3Q8NGG8 313 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 FANK1Q8TC84 345 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 OR8B2Q96RD0 313 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 ABCD2Q9UBJ2 740 aa15.39■□□□□ 0.05
HDAC6-231ENST00000488905 FAM32AQ9Y421 112 aaKnown RBP15.39■□□□□ 0.05
HDAC6-231ENST00000488905 SOX21Q9Y651 276 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-231ENST00000488905 PRKDCP78527 4128 aaKnown RBP15.38■□□□□ 0.05
HDAC6-231ENST00000488905 MDFIC2A0A1B0GVS7 189 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 NDUFAB1O14561 156 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 PPP1R3DO95685 299 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 HLA-DPB1P04440 258 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 SELEP16581 610 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 FPR3P25089 353 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 GATA4P43694 442 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 PRSS12P56730 875 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 KRTAP27-1Q3LI81 207 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 FAM201AQ5SY85 155 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 HACD2Q6Y1H2 254 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 COLCA1Q6ZS62 124 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 DHRS1Q96LJ7 313 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 HCAR1Q9BXC0 346 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 CCDC134Q9H6E4 229 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 EFCAB1Q9HAE3 211 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 TMEM100Q9NV29 134 aa15.38■□□□□ 0.05
HDAC6-231ENST00000488905 POM121CA8CG34 1229 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 PHYHO14832 338 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 DIRAS1O95057 198 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 ACSM4P0C7M7 580 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 PMELP40967 661 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 RSPO1Q2MKA7 263 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-231ENST00000488905 SLC18B1Q6NT16 456 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 CFAP77Q6ZQR2 320 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 LINC00346Q8IVM7 164 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 OR6V1Q8N148 313 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 SLC26A10Q8NG04 563 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 OR52J3Q8NH60 311 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 Q8TCH9 128 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 TAF15Q92804 592 aaKnown RBP eCLIP15.37■□□□□ 0.05
HDAC6-231ENST00000488905 C7orf34Q96L11 122 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 ERMAPQ96PL5 475 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-231ENST00000488905 NUDT16L1Q9BRJ7 211 aaKnown RBP15.37■□□□□ 0.05
HDAC6-231ENST00000488905 CLN8Q9UBY8 286 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 B9D1Q9UPM9 204 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 WNK1Q9H4A3 2382 aa15.37■□□□□ 0.05
HDAC6-231ENST00000488905 VWFP04275 2813 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 KIR2DS1A0A191URI9 304 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 IRF2P14316 349 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 MDKP21741 143 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-231ENST00000488905 MDH1P40925 334 aaKnown RBP15.36■□□□□ 0.05
HDAC6-231ENST00000488905 MAB21L1Q13394 359 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 GK2Q14410 553 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms