RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CHCHD2Q9Y6H1 151 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-207ENST00000486828 DMDP11532 3685 aa15.98■□□□□ 0.15
PDLIM7-207ENST00000486828 PRR33A8MZF0 331 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 ZNF814B7Z6K7 855 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 TP53I11O14683 189 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 YKT6O15498 198 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 ITGB2P05107 769 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 C4BPBP20851 252 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 EIF1P41567 113 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 GRK1Q15835 563 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 SLC25A47Q6Q0C1 308 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 OR1M1Q8NGA1 313 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 ADAT3Q96EY9 351 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 ALX4Q9H161 411 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 CNTD2Q9H8S5 307 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 SEC61A2Q9H9S3 476 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 MYEF2Q9P2K5 600 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 UPB1Q9UBR1 384 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 FBXO4Q9UKT5 387 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 RAB22AQ9UL26 194 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 HDGFL3Q9Y3E1 203 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 RALGAPA1Q6GYQ0 2036 aa15.97■□□□□ 0.15
PDLIM7-207ENST00000486828 ZNF878C9JN71 531 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 M0R233 179 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 FKBP2P26885 142 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 GNALP38405 381 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 CLDN6P56747 220 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 RIPPLY1Q0D2K3 151 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 RHOUQ7L0Q8 258 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 MUC20Q8N307 709 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 OR2AK2Q8NG84 335 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 OR1J2Q8NGS2 313 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 OR2AJ1Q8NGZ0 328 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 MOB1AQ9H8S9 216 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 TMEM138Q9NPI0 162 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 UBQLN2Q9UHD9 624 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 GPN3Q9UHW5 284 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 POLR1DQ9Y2S0 133 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 AUP1Q9Y679 476 aa15.96■□□□□ 0.15
PDLIM7-207ENST00000486828 METTL21EPA6NDL7 271 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 CD74P04233 296 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 ZNF28P17035 718 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 MFAP5Q13361 173 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 RAB12Q6IQ22 244 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 GALNT16Q8N428 558 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 SLC22A24Q8N4F4 322 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 OR52N4Q8NGI2 321 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 PNPLA2Q96AD5 504 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 ZBTB8AQ96BR9 441 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 WDR89Q96FK6 387 aaPredicted RBP15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 UQCC2Q9BRT2 126 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 LRFN3Q9BTN0 628 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 CDCP1Q9H5V8 836 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 OPN4Q9UHM6 478 aa15.96■□□□□ 0.14
PDLIM7-207ENST00000486828 MYO15AQ9UKN7 3530 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 PI4KAP42356 2102 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 LOC102725191A0A1B0GVB3 256 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 AQP7P3A6NL99 342 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 GDF9O60383 454 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 CYB5AP00167 134 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 ZNF43P17038 809 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 CXCL2P19875 107 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 CDAP32320 146 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 SFTPDP35247 375 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 P2RX3P56373 397 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 OPCMLQ14982 345 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 HIST3H3Q16695 136 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 C2orf68Q2NKX9 166 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 TMEM176BQ3YBM2 270 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 CLLU1Q5K131 121 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 PRAMEF20Q5VT98 475 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 CARD17Q5XLA6 110 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 ZNF529Q6P280 563 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 ACBD4Q8NC06 268 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 OR5D14Q8NGL3 314 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 CCDC107Q8WV48 283 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 AQP3Q92482 292 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 ELMOD3Q96FG2 381 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 SLC25A21Q9BQT8 299 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 B3GNT4Q9C0J1 378 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 CHST6Q9GZX3 395 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 ZMAT3Q9HA38 289 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 KLK13Q9UKR3 277 aa15.95■□□□□ 0.14
PDLIM7-207ENST00000486828 IGHV1-45A0A0A0MS14 117 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 A0A1B0GTI1 187 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 RPS10-NUDT3A0A1W2PQS6 291 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 TMEM235A6NFC5 223 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 L7N2F9 121 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 M0QYG6 137 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 RAMP1O60894 148 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 BPNT1O95861 308 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 CFDP00746 253 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 CFIP05156 583 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 RAB3AP20336 220 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 NFYAP23511 347 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 H2BFSP57053 126 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 KCNMB1Q16558 191 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 ZNF260Q3ZCT1 412 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 IDO2Q6ZQW0 420 aa15.94■□□□□ 0.14
PDLIM7-207ENST00000486828 PAQR4Q8N4S7 273 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms