RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 H7C417 338 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 RAB29O14966 203 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 NVLO15381 856 aaKnown RBP2.17□□□□□ -2.06
LTN1-206ENST00000486427 KLHL41O60662 606 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 PABPC4LP0CB38 370 aaKnown RBP2.17□□□□□ -2.06
LTN1-206ENST00000486427 ERGP11308 486 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 TNNT2P45379 298 aaPredicted RBP2.17□□□□□ -2.06
LTN1-206ENST00000486427 TMED10P49755 219 aaKnown RBP2.17□□□□□ -2.06
LTN1-206ENST00000486427 XKR7Q5GH72 579 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 GPR107Q5VW38 600 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 ADNP2Q6IQ32 1131 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 ZYG11AQ6WRX3 759 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 CDH26Q8IXH8 852 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 SLC35G3Q8N808 338 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 C11orf72Q8NBR9 251 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 OR56B2PQ8NGI1 322 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 ELMO1Q92556 727 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 KIFAP3Q92845 792 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 MTFP1Q9UDX5 166 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 SEC16AO15027 2179 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.16□□□□□ -2.06
LTN1-206ENST00000486427 GOLGA8OA6NCC3 632 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 GABRR3A8MPY1 467 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 GOLGA8NF8WBI6 632 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 CLOCKO15516 846 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 SEMA3DO95025 777 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 ACSM4P0C7M7 580 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 CD37P11049 281 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 PRLHRP49683 370 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 CDH6P55285 790 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 RPL23P62829 140 aaKnown RBP2.16□□□□□ -2.06
LTN1-206ENST00000486427 FAM53BQ14153 422 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 CHRNA6Q15825 494 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 TEX30Q5JUR7 227 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 SLC8B1Q6J4K2 584 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 CASP12Q6UXS9 341 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 TMEM136Q6ZRR5 245 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 TMEM150AQ86TG1 271 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 NKAIN4Q8IVV8 208 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 ZNF664Q8N3J9 261 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 GTPBP8Q8N3Z3 284 aaPredicted RBP2.16□□□□□ -2.06
LTN1-206ENST00000486427 CENPKQ9BS16 269 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 NUP58Q9BVL2 599 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 SAMD10Q9BYL1 202 aa2.16□□□□□ -2.06
LTN1-206ENST00000486427 ZSCAN16Q9H4T2 348 aaPredicted RBP2.16□□□□□ -2.06
LTN1-206ENST00000486427 A0A1B0GW55 424 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 GLSO94925 669 aaPredicted RBP2.15□□□□□ -2.07
LTN1-206ENST00000486427 CYB5R3P00387 301 aaPredicted RBP2.15□□□□□ -2.07
LTN1-206ENST00000486427 IGHV3-11P01762 117 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 DUX4L2P0CJ85 424 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 DUX4L3P0CJ86 424 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 DUX4L5P0CJ88 424 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 DUX4L6P0CJ89 424 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 DUX4L7P0CJ90 424 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 TROVE2P10155 538 aaKnown RBP eCLIP2.15□□□□□ -2.07
LTN1-206ENST00000486427 ZNF24P17028 368 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 ATF6P18850 670 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 TNFSF9P41273 254 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 HMGN5P82970 282 aaKnown RBP2.15□□□□□ -2.07
LTN1-206ENST00000486427 TGM3Q08188 693 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 DCPSQ96C86 337 aaKnown RBP2.15□□□□□ -2.07
LTN1-206ENST00000486427 RHOXF2Q9BQY4 288 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 LZTS2Q9BRK4 669 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 UXTQ9UBK9 157 aaPredicted RBP2.15□□□□□ -2.07
LTN1-206ENST00000486427 DUX4Q9UBX2 424 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 LGALS13Q9UHV8 139 aa2.15□□□□□ -2.07
LTN1-206ENST00000486427 DENND4AQ7Z401 1863 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 TRBV11-1A0A0K0K1C0 115 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 OR5H1A6NKK0 313 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 NDUFC2-KCTD14E9PQ53 114 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 FKBP6O75344 327 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 ANXA5P08758 320 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 U2AF2P26368 475 aaKnown RBP eCLIP2.14□□□□□ -2.07
LTN1-206ENST00000486427 LRRC74AQ0VAA2 488 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 IDI1Q13907 227 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 MRPL23Q16540 153 aaKnown RBP2.14□□□□□ -2.07
LTN1-206ENST00000486427 UBE2UQ5VVX9 321 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 C16orf47Q6ZP98 133 aaPredicted RBP2.14□□□□□ -2.07
LTN1-206ENST00000486427 IQCKQ8N0W5 287 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 ZNF680Q8NEM1 530 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 OR11H7Q8NGC8 314 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 TMEM230Q96A57 120 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 DNAJC1Q96KC8 554 aaKnown RBP2.14□□□□□ -2.07
LTN1-206ENST00000486427 ZFP3Q96NJ6 502 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 COL21A1Q96P44 957 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 SDK2Q58EX2 2172 aa2.14□□□□□ -2.07
LTN1-206ENST00000486427 IGHV3-49A0A0A0MS15 119 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 AIM2O14862 343 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 RNF13O43567 381 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 CIB2O75838 187 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 OR2J3O76001 311 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 LHBP01229 141 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 ZNF235Q14590 738 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 RBMY1FQ15415 496 aaKnown RBP2.13□□□□□ -2.07
LTN1-206ENST00000486427 SOHLH1Q5JUK2 328 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 CCDC183Q5T5S1 534 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 ARMC12Q5T9G4 340 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 C9orf135Q5VTT2 229 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 REEP3Q6NUK4 255 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 MBOAT1Q6ZNC8 495 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms