RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 COL22A1Q8NFW1 1626 aaPredicted RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 A0A0U1RQV1 116 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 KBTBD11-OT1A0A1B0GTJ5 212 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 TMEM223A0PJW6 202 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 H7C417 338 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 WRBO00258 174 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 SLC9A3R1O14745 358 aaPredicted RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 RAD51BO15315 384 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ZNF207O43670 478 aaKnown RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 FGF4P08620 206 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ADRA2AP08913 450 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 OR8G3PP0DMU2 310 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ERGP11308 486 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ANXA8P13928 327 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 CTRB1P17538 263 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 RAB3AP20336 220 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 GSTM3P21266 225 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 DTYMKP23919 212 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 CD34P28906 385 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 HMOX2P30519 316 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ATP5OP48047 213 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 HCAR3P49019 387 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 P2RX1P51575 399 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 PPP1CBP62140 327 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 PRR3P79522 188 aaKnown RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 SEMG2Q02383 582 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ITIH4Q14624 930 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 SNRNP35Q16560 246 aaKnown RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 SMUG1Q53HV7 270 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ZNF684Q5T5D7 378 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ANXA8L1Q5VT79 327 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 FBXW9Q5XUX1 488 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 SPESP1Q6UW49 350 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 C12orf54Q6X4T0 127 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 MBOAT2Q6ZWT7 520 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 MRPL55Q7Z7F7 128 aaKnown RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 CALHM3Q86XJ0 350 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 CBLN2Q8IUK8 224 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 C11orf72Q8NBR9 251 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 CHST4Q8NCG5 386 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 OR52K2Q8NGK3 314 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 OR8U1Q8NH10 309 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 COQ8AQ8NI60 647 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 SYNPRQ8TBG9 265 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 OR51E1Q8TCB6 317 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ZCCHC13Q8WW36 166 aaKnown RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 APH1BQ8WW43 257 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 RBMXL1Q96E39 390 aaKnown RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 CAMK2N2Q96S95 79 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ZNF382Q96SR6 550 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 LZTS2Q9BRK4 669 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 UCK2Q9BZX2 261 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 TMEM38AQ9H6F2 299 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 AUNIPQ9H7T9 357 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 CCNB1IP1Q9NPC3 277 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 ACP6Q9NPH0 428 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 SIRT7Q9NRC8 400 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 CLN8Q9UBY8 286 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 MTFP1Q9UDX5 166 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 TBC1D24Q9ULP9 559 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 TSSC4Q9Y5U2 329 aaPredicted RBP1.56□□□□□ -2.16
GCFC2-209ENST00000486016 TMEM14AQ9Y6G1 99 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 UBN2Q6ZU65 1347 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 DENND4AQ7Z401 1863 aa1.56□□□□□ -2.16
GCFC2-209ENST00000486016 MUC6Q6W4X9 2439 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 KCNE1BA0A087WTH5 132 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 IGKV1-8A0A0C4DH67 115 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 OR6C74A6NCV1 312 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 H7C0C1 242 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 H7C1H1 209 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 NVLO15381 856 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 RBFOX2O43251 390 aaKnown RBP eCLIP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 YIF1AO95070 293 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 VAMP5O95183 116 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 RCBTB2O95199 551 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 FGFR1OPO95684 399 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 LSM8O95777 96 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 APCSP02743 223 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 CTSLP07711 333 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 CLTAP09496 248 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 OR56A5P0C7T3 313 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 CSNK2A2P19784 350 aaPredicted RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 KIR3DL2P43630 455 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 RPS5P46782 204 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 CDKN2DP55273 166 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 IFT88Q13099 833 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 IL18Q14116 193 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 ZNF266Q14584 549 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 AVPI1Q5T686 147 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 TPTE2P1Q5T6R2 138 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 C1orf185Q5T7R7 199 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 SAXO2Q658L1 398 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 CLEC2AQ6UVW9 174 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 CALHM1Q8IU99 346 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 UBALD2Q8IYN6 164 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 FAM71AQ8IYT1 594 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 LGI3Q8N145 548 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 CBR4Q8N4T8 237 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 JAGN1Q8N5M9 183 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 COX18Q8N8Q8 333 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms