RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 LOC100509620A0A075B734 347 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 A0A1W2PPW3 197 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ACOD1A6NK06 481 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 E7EQL1 145 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 SYNGR3O43761 229 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ICMTO60725 284 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 GPANK1O95872 356 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 PLAUP00749 431 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 LCATP04180 440 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 OR4A8P0C604 315 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 HOXB4P17483 251 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ALOX5APP20292 161 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 SLC2A5P22732 501 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 LOXP28300 417 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-208ENST00000485618 CALCRP30988 508 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 THBS4P35443 961 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 VHLP40337 213 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 KLF3P57682 345 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-208ENST00000485618 PPP1CBP62140 327 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 HGFACQ04756 655 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 EGR3Q06889 387 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 EFNB3Q15768 340 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 CCDC92Q53HC0 331 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-208ENST00000485618 LINC01590Q5TEZ4 76 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 KCTD20Q7Z5Y7 419 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 TGIF2LYQ8IUE0 185 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF584Q8IVC4 421 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 LINC00346Q8IVM7 164 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 FTMTQ8N4E7 242 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF283Q8N7M2 679 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 BBS1Q8NFJ9 593 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ABHD4Q8TB40 342 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 HAVCR2Q8TDQ0 301 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 RNF133Q8WVZ7 376 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 KCNJ15Q99712 375 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ABHD6Q9BV23 337 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ADI1Q9BV57 179 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 RAB1BQ9H0U4 201 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 OR10A2Q9H208 303 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 OPA3Q9H6K4 179 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 DYNLRB1Q9NP97 96 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 INPP5EQ9NRR6 644 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 NKX1-2Q9UD57 310 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF391Q9UJN7 358 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 LAMP3Q9UQV4 416 aa7.14□□□□□ -1.27
SF3A1-208ENST00000485618 DAPL1A0PJW8 107 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 M0R135 149 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ENTPD6O75354 484 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 SULT1C4O75897 302 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ATE1O95260 518 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 KRT8P05787 483 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 SBK2P0C263 348 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 FAM157BP0CG42 384 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 CCL2P13500 99 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF250P15622 560 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 TNFSF4P23510 183 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 DCTDP32321 178 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 NAA10P41227 235 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-208ENST00000485618 RIDAP52758 137 aaKnown RBP7.13□□□□□ -1.27
SF3A1-208ENST00000485618 NKX6-1P78426 367 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-208ENST00000485618 RAB40BQ12829 278 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ADIPOQQ15848 244 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 NKPD1Q17RQ9 610 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF829Q3KNS6 432 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF691Q5VV52 312 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 CFAP77Q6ZQR2 320 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 PLEKHG7Q6ZR37 379 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 FAM220AQ7Z4H9 259 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 THAP5Q7Z6K1 395 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 DTX2Q86UW9 622 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 SLC35F2Q8IXU6 374 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF679Q8IYX0 411 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ACBD7Q8N6N7 88 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 OR10H4Q8NGA5 316 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 OR51G2Q8NGK0 314 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ST7LQ8TDW4 575 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 MRPL24Q96A35 216 aaKnown RBP7.13□□□□□ -1.27
SF3A1-208ENST00000485618 RNFT2Q96EX2 444 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF799Q96GE5 643 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 DIRC2Q96SL1 478 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 C1QTNF5Q9BXJ0 243 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 CXXC4Q9H2H0 198 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 RGCCQ9H4X1 137 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 SCN3BQ9NY72 215 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 DNAJC27Q9NZQ0 273 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 IKZF2Q9UKS7 526 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 PLEKHA6Q9Y2H5 1048 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 RTTNQ86VV8 2226 aa7.13□□□□□ -1.27
SF3A1-208ENST00000485618 HRNRQ86YZ3 2850 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-208ENST00000485618 DSCAMO60469 2012 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 EFCAB10A6NFE3 127 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 M0R233 179 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 XRCC2O43543 280 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 TIMM8AO60220 97 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 SELENOFO60613 162 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ANXA2P07355 339 aaKnown RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 MRPL3P09001 348 aaKnown RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ACSM4P0C7M7 580 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 RAC2P15153 192 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 MYL12AP19105 171 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms