RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CPLX1O14810 134 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 GMFGO60234 142 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 EIF1BO60739 113 aaKnown RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 SEMA3DO95025 777 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 SERPIND1P05546 499 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 ACSM4P0C7M7 580 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 CD28P10747 220 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 ERGP11308 486 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 IFNA8P32881 189 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 PRPHP41219 470 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 EIF1P41567 113 aaKnown RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 SSR1P43307 286 aaKnown RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 IFNAR2P48551 515 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 TPMTP51580 245 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 CCNHP51946 323 aaPredicted RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 VSX2P58304 361 aaPredicted RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 ELF3P78545 371 aaPredicted RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 TGFBIQ15582 683 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 OR7A5Q15622 319 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 ANKDD1AQ495B1 522 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 C6orf226Q5I0X4 101 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 PMF1Q6P1K2 205 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 CCDC73Q6ZRK6 1079 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 N4BP2L2Q92802 583 aaPredicted RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 ZBED3Q96IU2 234 aaPredicted RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 SLC39A3Q9BRY0 314 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 CHCHD7Q9BUK0 85 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 ROPN1BQ9BZX4 212 aaPredicted RBP1.11□□□□□ -2.23
SCAF11-207ENST00000484275 NT5C3AQ9H0P0 336 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 ADGRA3Q8IWK6 1321 aa1.11□□□□□ -2.23
SCAF11-207ENST00000484275 SMIM26A0A096LP01 95 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 CLRN2A0PK11 232 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 SDHAF1A6NFY7 115 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 LRRIQ3A6PVS8 624 aaPredicted RBP1.1□□□□□ -2.23
SCAF11-207ENST00000484275 H0YCG3 227 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 PLPP1O14494 284 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 SPAG6O75602 509 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 PAHP00439 452 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 SERPINA5P05154 406 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 PTMSP20962 102 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 GLRA2P23416 452 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 CHMLP26374 656 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 HNRNPH3P31942 346 aaKnown RBP1.1□□□□□ -2.23
SCAF11-207ENST00000484275 CEBPDP49716 269 aaPredicted RBP1.1□□□□□ -2.23
SCAF11-207ENST00000484275 SIGLEC14Q08ET2 396 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 IMMTQ16891 758 aaKnown RBP1.1□□□□□ -2.23
SCAF11-207ENST00000484275 PRSS54Q6PEW0 395 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 DEGS2Q6QHC5 323 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 ARL6IP6Q8N6S5 226 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 GPR26Q8NDV2 337 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 OR4M1Q8NGD0 313 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 OR2A1Q8NGT9 310 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 DCPSQ96C86 337 aaKnown RBP1.1□□□□□ -2.23
SCAF11-207ENST00000484275 TRIM44Q96DX7 344 aaPredicted RBP1.1□□□□□ -2.23
SCAF11-207ENST00000484275 MICU1Q9BPX6 476 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 CRACR2AQ9BSW2 395 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 ETNK2Q9NVF9 386 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 ZNF492Q9P255 531 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 EXTL2Q9UBQ6 330 aa1.1□□□□□ -2.23
SCAF11-207ENST00000484275 LOXHD1Q8IVV2 1947 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 A0A0J9YXV3 536 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.09□□□□□ -2.23
SCAF11-207ENST00000484275 PLIN3O60664 434 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 SERPINB7O75635 380 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 TSPAN13O95857 204 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 IL1BP01584 269 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 MPV17P39210 176 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 GALR1P47211 349 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 GBX2P52951 348 aaPredicted RBP1.09□□□□□ -2.23
SCAF11-207ENST00000484275 AIF1P55008 147 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 RPS23P62266 143 aaKnown RBP1.09□□□□□ -2.23
SCAF11-207ENST00000484275 GPM6BQ13491 265 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 QPRTQ15274 297 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 PYDC2Q56P42 97 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 CSGALNACT2Q8N6G5 542 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 PRELID2Q8N945 189 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 OR52M1Q8NGK5 317 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 OR8J1Q8NGP2 316 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 C18orf15Q96N68 181 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 GPR82Q96P67 336 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 VCX2Q9H322 139 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 LRRC40Q9H9A6 602 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 CSNK1G1Q9HCP0 422 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 RHBDL2Q9NX52 303 aa1.09□□□□□ -2.23
SCAF11-207ENST00000484275 RPRD2Q5VT52 1461 aaKnown RBP1.09□□□□□ -2.24
SCAF11-207ENST00000484275 COL22A1Q8NFW1 1626 aaPredicted RBP1.08□□□□□ -2.24
SCAF11-207ENST00000484275 OR52A4PA6NMU1 304 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 MTX2O75431 263 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 IGLV7-43P04211 117 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 ZNF43P17038 809 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 ATF6P18850 670 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 CALRP27797 417 aaKnown RBP1.08□□□□□ -2.24
SCAF11-207ENST00000484275 POLR2IP36954 125 aaKnown RBP1.08□□□□□ -2.24
SCAF11-207ENST00000484275 RBM34P42696 430 aaKnown RBP1.08□□□□□ -2.24
SCAF11-207ENST00000484275 NSG1P42857 185 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 HNMTP50135 292 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 ARFIP1P53367 373 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 ACTR1AP61163 376 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 TMEM69Q5SWH9 247 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 NT5DC3Q86UY8 548 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms