RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 LMAN1LQ9HAT1 526 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 ELOVL3Q9HB03 270 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 DHDHQ9UQ10 334 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 STARD10Q9Y365 291 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 INSL6Q9Y581 213 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 FANCMQ8IYD8 2048 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 LAMA3Q16787 3333 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 TNRC18O15417 2968 aaPredicted RBP10.58□□□□□ -0.72
VTI1A-205ENST00000483122 UMAD1C9J7I0 102 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 NME2P1O60361 137 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 SNCAP37840 140 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 S100A10P60903 97 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 RPS23P62266 143 aaKnown RBP10.58□□□□□ -0.72
VTI1A-205ENST00000483122 TDGQ13569 410 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 FCRL6Q6DN72 434 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 EIF5AL1Q6IS14 154 aaKnown RBP10.58□□□□□ -0.72
VTI1A-205ENST00000483122 SPNS3Q6ZMD2 512 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 SLC35D2Q76EJ3 337 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 FOXRED2Q8IWF2 684 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 JAGN1Q8N5M9 183 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF615Q8N8J6 731 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 CHST4Q8NCG5 386 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 LYPD6BQ8NI32 183 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 TMEM230Q96A57 120 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 ZDHHC8Q9ULC8 765 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 HDGFL3Q9Y3E1 203 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 A0A087WUJ7 227 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 A0A087WV62 115 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 TSPAN15O95858 294 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 HKR1P10072 659 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 DDTP30046 118 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 CCR2P41597 374 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 SPCS3P61009 180 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 EGR3Q06889 387 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 MEP1BQ16820 701 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 ITPRIPL2Q3MIP1 535 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 PDZD11Q5EBL8 140 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 PHF19Q5T6S3 580 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 GFI1BQ5VTD9 330 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 CLEC9AQ6UXN8 241 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 PNLDC1Q8NA58 520 aaKnown RBP10.57□□□□□ -0.72
VTI1A-205ENST00000483122 UBAC2Q8NBM4 344 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 TMEM52Q8NDY8 209 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 CD300LFQ8TDQ1 290 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 ST7LQ8TDW4 575 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 MR1Q95460 341 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 GAL3ST3Q96A11 431 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 MISP3Q96FF7 219 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 POLE3Q9NRF9 147 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 A0A087X0M5 115 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 A0A1B0GX30 115 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 BTBD17A6NE02 478 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 FGF17O60258 216 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 OR2C1O95371 312 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 LRG1P02750 347 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 PI3P19957 117 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 MAS1LP35410 378 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 CASP6P55212 293 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 PRPS1P60891 318 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 LSM6P62312 80 aaKnown RBP10.57□□□□□ -0.72
VTI1A-205ENST00000483122 EIF5AP63241 154 aaKnown RBP10.57□□□□□ -0.72
VTI1A-205ENST00000483122 CDK3Q00526 305 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 MFGE8Q08431 387 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-205ENST00000483122 SQSTM1Q13501 440 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 GPR18Q14330 331 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 RSU1Q15404 277 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 ANKRD55Q3KP44 614 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 MESTQ5EB52 335 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 CLEC18BQ6UXF7 455 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF550Q7Z398 422 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 TDHQ8IZJ6 230 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 C10orf53Q8N6V4 93 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 LRRC75AQ8NAA5 344 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 OR4D6Q8NGJ1 314 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 ASB5Q8WWX0 329 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 RAB7BQ96AH8 199 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 RSPRY1Q96DX4 576 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 GPX7Q96SL4 187 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF587Q96SQ5 575 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-205ENST00000483122 SMIM3Q9BZL3 60 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 EIF5A2Q9GZV4 153 aaKnown RBP10.57□□□□□ -0.72
VTI1A-205ENST00000483122 ADAM19Q9H013 955 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 GSKIPQ9P0R6 139 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 GDF2Q9UK05 429 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-205ENST00000483122 MMP24Q9Y5R2 645 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 COLEC10Q9Y6Z7 277 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 DOCK9Q9BZ29 2069 aa10.57□□□□□ -0.72
VTI1A-205ENST00000483122 IGKV1D-42A0A075B6H8 117 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 RAB27BO00194 218 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 BCAT2O15382 392 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-205ENST00000483122 IFNA6P05013 189 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 TBC1D3HP0C7X1 549 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 CEBPBP17676 345 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 IGFBP3P17936 291 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-205ENST00000483122 SLC17A1Q14916 467 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 RHEBQ15382 184 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 ERN2Q76MJ5 926 aaKnown RBP10.56□□□□□ -0.72
VTI1A-205ENST00000483122 HOGA1Q86XE5 327 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 OR1J1Q8NGS3 322 aa10.56□□□□□ -0.72
VTI1A-205ENST00000483122 RELTQ969Z4 430 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms