RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZNF878C9JN71 531 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 M0R135 149 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 SELENOFO60613 162 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 LIPAP38571 399 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 ZIK1Q3SY52 487 aaPredicted RBP17.89■□□□□ 0.45
SEC13-217ENST00000482647 DNM1P46Q6ZS02 220 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 COLCA1Q6ZS62 124 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 SPATC1Q76KD6 591 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 RHOUQ7L0Q8 258 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 OR8J1Q8NGP2 316 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 OTOSQ8NHW6 89 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 CMBLQ96DG6 245 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 ZNF799Q96GE5 643 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 KCNJ15Q99712 375 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 SLC29A1Q99808 456 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 RHNO1Q9BSD3 238 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 ABHD6Q9BV23 337 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 TPK1Q9H3S4 243 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 CYSLTR2Q9NS75 346 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 F8P00451 2351 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 CCDC182A6NF36 153 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 SLC22A31A6NKX4 558 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 LY6HO94772 140 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 LCATP04180 440 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 CSF3P09919 207 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 ANPEPP15144 967 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 NAA10P41227 235 aaPredicted RBP17.88■□□□□ 0.45
SEC13-217ENST00000482647 SLC6A9P48067 706 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 GRB2P62993 217 aaKnown RBP17.88■□□□□ 0.45
SEC13-217ENST00000482647 PSG7Q13046 419 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 TNK1Q13470 666 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 RCN1Q15293 331 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 PCGF3Q3KNV8 242 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 DRAM2Q6UX65 266 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 SLC16A9Q7RTY1 509 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 BCDIN3DQ7Z5W3 292 aaKnown RBP17.88■□□□□ 0.45
SEC13-217ENST00000482647 GID4Q8IVV7 300 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 ZNF525Q8N782 197 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 THEM6Q8WUY1 208 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 RNF133Q8WVZ7 376 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 TRUB1Q8WWH5 349 aaKnown RBP17.88■□□□□ 0.45
SEC13-217ENST00000482647 HAVCR1Q96D42 359 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 HRASLS5Q96KN8 279 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 POFUT1Q9H488 388 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 TOR3AQ9H497 397 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 MYOZ1Q9NP98 299 aaPredicted RBP17.88■□□□□ 0.45
SEC13-217ENST00000482647 IMPAD1Q9NX62 359 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 CGGBP1Q9UFW8 167 aaPredicted RBP17.88■□□□□ 0.45
SEC13-217ENST00000482647 ARFGEF3Q5TH69 2177 aa17.88■□□□□ 0.45
SEC13-217ENST00000482647 FLNAP21333 2647 aaKnown RBP17.87■□□□□ 0.45
SEC13-217ENST00000482647 C17orf100A8MU93 164 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 TIMM8AO60220 97 aaPredicted RBP17.87■□□□□ 0.45
SEC13-217ENST00000482647 LYNP07948 512 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 RAC2P15153 192 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 FOSL1P15407 271 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 OTX1P32242 354 aaPredicted RBP17.87■□□□□ 0.45
SEC13-217ENST00000482647 MALLQ13021 153 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 NAA40Q86UY6 237 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 FAM168AQ92567 244 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 YIPF3Q9GZM5 350 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 PTTG3PQ9NZH4 202 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 LAMP5Q9UJQ1 280 aa17.87■□□□□ 0.45
SEC13-217ENST00000482647 PURGQ9UJV8 347 aaKnown RBP17.87■□□□□ 0.45
SEC13-217ENST00000482647 ZNF469Q96JG9 3925 aaPredicted RBP17.86■□□□□ 0.45
SEC13-217ENST00000482647 APOC1P02654 83 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 DAOP14920 347 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 KITLGP21583 273 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 HSD11B1P28845 292 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 PDLIM4P50479 330 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 ZNF81P51508 661 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 MMP15P51511 669 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 PRKXP51817 358 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 GGTLC2Q14390 218 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 HLXQ14774 488 aaPredicted RBP17.86■□□□□ 0.45
SEC13-217ENST00000482647 TRIP10Q15642 601 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 ZMAT1Q5H9K5 638 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 FBXW12Q6X9E4 464 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.86■□□□□ 0.45
SEC13-217ENST00000482647 LURAP1LQ8IV03 231 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 FAM81AQ8TBF8 368 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 C18orf12Q96KH6 178 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 CNN2Q99439 309 aaKnown RBP17.86■□□□□ 0.45
SEC13-217ENST00000482647 DLL4Q9NR61 685 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 TMEM14AQ9Y6G1 99 aa17.86■□□□□ 0.45
SEC13-217ENST00000482647 H7C1Q1 480 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 MRPL3P09001 348 aaKnown RBP17.85■□□□□ 0.45
SEC13-217ENST00000482647 H2BFMP0C1H6 154 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 ALOX5APP20292 161 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 OPRL1P41146 370 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 TMEM255AQ5JRV8 349 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 ZNF283Q8N7M2 679 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 UBASH3BQ8TF42 649 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 RFKQ969G6 155 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 MBOAT4Q96T53 435 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 AMELYQ99218 206 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 SP140LQ9H930 580 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 C8orf4Q9NR00 106 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 HAO2Q9NYQ3 351 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 NKIRAS2Q9NYR9 191 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 WARS2Q9UGM6 360 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms