RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PPP1R3CQ9UQK1 317 aa8.84□□□□□ -0.99
CPSF4-212ENST00000482251 NPTNQ9Y639 398 aa8.84□□□□□ -0.99
CPSF4-212ENST00000482251 F5H5P2 479 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 BHLHE40O14503 412 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 VENTXO95231 258 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 CYB5R3P00387 301 aaPredicted RBP8.83□□□□□ -1
CPSF4-212ENST00000482251 GASTP01350 101 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 HLA-DPB1P04440 258 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 GYPBP06028 91 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 ANPEPP15144 967 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 RAC2P15153 192 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 TNFRSF1AP19438 455 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 EPHA1P21709 976 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 SLC6A9P48067 706 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 RGS6P49758 472 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 BTG1P62324 171 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 HIST1H3AP68431 136 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 TRAP1Q12931 704 aaKnown RBP8.83□□□□□ -1
CPSF4-212ENST00000482251 ZMYND11Q15326 602 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 HIST2H3PS2Q5TEC6 136 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 FBXW12Q6X9E4 464 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 HIST2H3AQ71DI3 136 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 NAA40Q86UY6 237 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 ZBTB46Q86UZ6 589 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 DHFR2Q86XF0 187 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 ZNF283Q8N7M2 679 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.83□□□□□ -1
CPSF4-212ENST00000482251 CCDC197Q8NCU1 140 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 OR5L1Q8NGL2 311 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 ST7LQ8TDW4 575 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 C22orf15Q8WYQ4 148 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 PTP4A1Q93096 173 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 NSL1Q96IY1 281 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 MAP6Q96JE9 813 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 COG8Q96MW5 612 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 SIGLEC11Q96RL6 698 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 PNRC2Q9NPJ4 139 aaKnown RBP8.83□□□□□ -1
CPSF4-212ENST00000482251 ATPIF1Q9UII2 106 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 PCDHB10Q9UN67 800 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 SAMHD1Q9Y3Z3 626 aaKnown RBP8.83□□□□□ -1
CPSF4-212ENST00000482251 ARHGAP32A7KAX9 2087 aa8.83□□□□□ -1
CPSF4-212ENST00000482251 J3QW42 95 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 HAX1O00165 279 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 MLNRO43193 412 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 KRT36O76013 467 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 LCATP04180 440 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 SPARCP09486 303 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 ACSM4P0C7M7 580 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 CLUP10909 449 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 ZNF823P16415 610 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 ZFP36P26651 326 aaKnown RBP8.82□□□□□ -1
CPSF4-212ENST00000482251 GGT2P36268 569 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 MAGEA2P43356 314 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 MNAT1P51948 309 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 HOXA4Q00056 320 aaPredicted RBP8.82□□□□□ -1
CPSF4-212ENST00000482251 MS4A2Q01362 244 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 CRMP1Q14194 572 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 RSPO1Q2MKA7 263 aaPredicted RBP8.82□□□□□ -1
CPSF4-212ENST00000482251 SNAI3Q3KNW1 292 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 SLC36A3Q495N2 470 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 SPATS1Q496A3 300 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 ZNF770Q6IQ21 691 aaPredicted RBP8.82□□□□□ -1
CPSF4-212ENST00000482251 LCN8Q6JVE9 175 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 SPATC1Q76KD6 591 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 MOGAT3Q86VF5 341 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 KLHL36Q8N4N3 616 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 IQCF1Q8N6M8 205 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 SLC37A3Q8NCC5 494 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 OR8G5Q8NG78 346 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 OR10S1Q8NGN2 331 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 OR4Q3Q8NH05 313 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 DVL3Q92997 716 aaPredicted RBP8.82□□□□□ -1
CPSF4-212ENST00000482251 MEGF10Q96KG7 1140 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 ZNF582Q96NG8 517 aaPredicted RBP8.82□□□□□ -1
CPSF4-212ENST00000482251 SLC6A7Q99884 636 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 TSSK6Q9BXA6 273 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 REEP1Q9H902 201 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 GCM1Q9NP62 436 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 IL19Q9UHD0 177 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 CYB5R1Q9UHQ9 305 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 N6AMT1Q9Y5N5 214 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 COMMD3-BMI1R4GMX3 469 aa8.82□□□□□ -1
CPSF4-212ENST00000482251 C5orf63A6NC05 138 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 IQCF6A8MYZ5 107 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 M0R135 149 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 SURF4O15260 269 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 IDH3BO43837 385 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 FAM107AO95990 144 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 SLC2A1P11166 492 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 CALB2P22676 271 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 TUBG1P23258 451 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 GK2Q14410 553 aaPredicted RBP8.81□□□□□ -1
CPSF4-212ENST00000482251 KRTAP27-1Q3LI81 207 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 FAM98BQ52LJ0 330 aaKnown RBP8.81□□□□□ -1
CPSF4-212ENST00000482251 FAM201AQ5SY85 155 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 OR2T5Q6IEZ7 315 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 RPL13AP3Q6NVV1 102 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 RASSF6Q6ZTQ3 369 aa8.81□□□□□ -1
CPSF4-212ENST00000482251 MRPL21Q7Z2W9 205 aaKnown RBP8.81□□□□□ -1
CPSF4-212ENST00000482251 DCXRQ7Z4W1 244 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms