RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 FAIMQ9NVQ4 179 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 FKBP14Q9NWM8 211 aa10.52□□□□□ -0.73
PTPRF-213ENST00000481019 EXOSC1Q9Y3B2 195 aaKnown RBP10.52□□□□□ -0.73
PTPRF-213ENST00000481019 ZFHX3Q15911 3703 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 TMCC2O75069 709 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 CLUP10909 449 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 CD99P14209 185 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 ATP6V1B1P15313 513 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 STOMP27105 288 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 NUDT6P53370 316 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 APOFQ13790 326 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 EFNB3Q15768 340 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 KCNMB1Q16558 191 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 SMN1Q16637 294 aaKnown RBP10.51□□□□□ -0.73
PTPRF-213ENST00000481019 CCDC92Q53HC0 331 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-213ENST00000481019 LAIR2Q6ISS4 152 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 CORO6Q6QEF8 472 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 DNM1P46Q6ZS02 220 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 VASH1Q7L8A9 365 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-213ENST00000481019 DPPA2Q7Z7J5 298 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 PROKR2Q8NFJ6 384 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 SLC26A10Q8NG04 563 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 OR51L1Q8NGJ5 315 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 OR9Q1Q8NGQ5 310 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 RORBQ92753 470 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 SORCS2Q96PQ0 1159 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 SYT3Q9BQG1 590 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 HCAR1Q9BXC0 346 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 NMNAT2Q9BZQ4 307 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 POFUT1Q9H488 388 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 GSX1Q9H4S2 264 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-213ENST00000481019 MED20Q9H944 212 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 AMBNQ9NP70 447 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 MRPL22Q9NWU5 206 aaKnown RBP10.51□□□□□ -0.73
PTPRF-213ENST00000481019 ASH2LQ9UBL3 628 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 DIMT1Q9UNQ2 313 aaKnown RBP10.51□□□□□ -0.73
PTPRF-213ENST00000481019 EXOGQ9Y2C4 368 aaKnown RBP10.51□□□□□ -0.73
PTPRF-213ENST00000481019 TIMM10BQ9Y5J6 103 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 LHFPL6Q9Y693 200 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 TMEM14AQ9Y6G1 99 aa10.51□□□□□ -0.73
PTPRF-213ENST00000481019 SETD2Q9BYW2 2564 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-213ENST00000481019 IQCMA0A1B0GVH7 501 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 C5orf49A4QMS7 147 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 FAM183AA6NL82 134 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 C12orf71A8MTZ7 269 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 B9A039 149 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 H7C417 338 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 RER1O15258 196 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 SSX4O60224 188 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 NGFP01138 241 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 GYPBP06028 91 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 JUNBP17275 347 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-213ENST00000481019 SPI1P17947 270 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 CCNOP22674 350 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 GLRXP35754 106 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 RPS27P42677 84 aaKnown RBP10.5□□□□□ -0.73
PTPRF-213ENST00000481019 UCP2P55851 309 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 HIST1H3AP68431 136 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 GLO1Q04760 184 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 TNK1Q13470 666 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 TBC1D28Q2M2D7 210 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 HIST2H3PS2Q5TEC6 136 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 TMPRSS11AQ6ZMR5 421 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 KCTD8Q6ZWB6 473 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 RFPL4BQ6ZWI9 263 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 HIST2H3AQ71DI3 136 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 LINC00346Q8IVM7 164 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 SPARTQ8N0X7 666 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 ACBD7Q8N6N7 88 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 HAVCR2Q8TDQ0 301 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 GTF3AQ92664 365 aaKnown RBP10.5□□□□□ -0.73
PTPRF-213ENST00000481019 MRPL24Q96A35 216 aaKnown RBP10.5□□□□□ -0.73
PTPRF-213ENST00000481019 JAM3Q9BX67 310 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 KCNN2Q9H2S1 579 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 CDH20Q9HBT6 801 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 FBXL3Q9UKT7 428 aa10.5□□□□□ -0.73
PTPRF-213ENST00000481019 SMIM31A0A1B0GVY4 71 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 TVP23AA6NH52 213 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 H7C1Q1 480 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 M0R129 80 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 PHYHO14832 338 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 MYL12BO14950 172 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 SYNGR3O43761 229 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 DBHP09172 617 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 OR2T7P0C7T2 308 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 ANOS1P23352 680 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 GSTT1P30711 240 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 APLNRP35414 380 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 MPV17P39210 176 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 ALDH3B1P43353 468 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 LSM6P62312 80 aaKnown RBP10.49□□□□□ -0.73
PTPRF-213ENST00000481019 GALK2Q01415 458 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 PLP2Q04941 152 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 GGTLC2Q14390 218 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 TBCEQ15813 527 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-213ENST00000481019 CLEC12BQ2HXU8 276 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 RSPO1Q2MKA7 263 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-213ENST00000481019 ALKBH6Q3KRA9 238 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 SPATA46Q5T0L3 261 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms