RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ALX3	O95076	343 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC2A10	O95528	541 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	IGLV1-44	P01699	117 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	HLA-DQA2	P01906	255 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	CTLA4	P16410	223 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	ZNF823	P16415	610 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	ACHE	P22303	614 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	FPR2	P25090	351 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	ZFP36	P26651	326 aa	Known RBP	13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	VHL	P40337	213 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	TMEM33	P57088	247 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	LMO4	P61968	165 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	LCN6	P62502	163 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	HSF2	Q03933	536 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	SNCB	Q16143	134 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	KCNMB1	Q16558	191 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	SGCA	Q16586	387 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	HIKESHI	Q53FT3	197 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	TMEM236	Q5W0B7	351 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC16A14	Q7RTX9	510 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	OR6V1	Q8N148	313 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	IL17RD	Q8NFM7	739 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	FAM81A	Q8TBF8	368 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	DDO	Q99489	341 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	PITX2	Q99697	317 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	CDADC1	Q9BWV3	514 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	TMPRSS13	Q9BYE2	586 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	NMNAT2	Q9BZQ4	307 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	C1orf198	Q9H425	327 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	CCNB1IP1	Q9NPC3	277 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894	HSPE1-MOB4	S4R3N1	261 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894		A0A0G2JMP0	313 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894		A0A0X1KG70	313 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC22A31	A6NKX4	558 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	CST2	P09228	141 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	CECR9	P0C854	216 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	B4GALT1	P15291	398 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	SPI1	P17947	270 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	PRTN3	P24158	256 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	GCH1	P30793	250 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	THBS4	P35443	961 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	CAPG	P40121	348 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	CAPZA2	P47755	286 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	SNRPG	P62308	76 aa	Known RBP	13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	PLP2	Q04941	152 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	FMOD	Q06828	376 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	TUSC1	Q2TAM9	212 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	ELFN2	Q5R3F8	820 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC25A30	Q5SVS4	291 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	NXNL2	Q5VZ03	156 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	PLBD1	Q6P4A8	553 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	LINGO2	Q7L985	606 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	CPO	Q8IVL8	374 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	ALDH16A1	Q8IZ83	802 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	TCEANC	Q8N8B7	351 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	CYB561A3	Q8NBI2	242 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	OR4M2	Q8NGB6	313 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	CYGB	Q8WWM9	190 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	MYCBP	Q99417	103 aa	Predicted RBP	13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	POLE4	Q9NR33	117 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	TREM2	Q9NZC2	230 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	COA3	Q9Y2R0	106 aa	Predicted RBP	13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	POLR1D	Q9Y2S0	133 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	PPIAL4A	Q9Y536	164 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	TIMM10B	Q9Y5J6	103 aa		13.28	□□□□□ -0.28
HDLBP-238	ENST00000479894	IGLV1-36	A0A0B4J1U3	117 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	GLCE	O94923	617 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	RAB36	O95755	333 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	ADRA2A	P08913	450 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	CALCR	P30988	508 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	POLR2I	P36954	125 aa	Known RBP	13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	EVX1	P49640	407 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	RPS7	P62081	194 aa	Known RBP	13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	HGFAC	Q04756	655 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	SCRN3	Q0VDG4	424 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	FBLN7	Q53RD9	439 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	RBMS3	Q6XE24	437 aa	Known RBP	13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	OR2AJ1	Q8NGZ0	328 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	RDH5	Q92781	318 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	PTP4A1	Q93096	173 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	MBOAT4	Q96T53	435 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	ADI1	Q9BV57	179 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894		Q9H521	79 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	NARFL	Q9H6Q4	476 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	RNF121	Q9H920	327 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	CLN6	Q9NWW5	311 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	WARS2	Q9UGM6	360 aa	Known RBP	13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	UGT2A1	Q9Y4X1	527 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894	ARHGAP32	A7KAX9	2087 aa		13.27	□□□□□ -0.29
HDLBP-238	ENST00000479894		A0A096LPE4	126 aa		13.26	□□□□□ -0.29
HDLBP-238	ENST00000479894		A0A1W2PPZ6	126 aa		13.26	□□□□□ -0.29
HDLBP-238	ENST00000479894	IGKV3-15	P01624	115 aa		13.26	□□□□□ -0.29
HDLBP-238	ENST00000479894	CBR1	P16152	277 aa		13.26	□□□□□ -0.29
HDLBP-238	ENST00000479894	ADRA2C	P18825	462 aa		13.26	□□□□□ -0.29
HDLBP-238	ENST00000479894	EPHA2	P29317	976 aa		13.26	□□□□□ -0.29
HDLBP-238	ENST00000479894	GSTT1	P30711	240 aa		13.26	□□□□□ -0.29
HDLBP-238	ENST00000479894	MRPS11	P82912	194 aa	Known RBP	13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms