RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 MRPS18BQ9Y676 258 aaKnown RBP3.66□□□□□ -1.82
BRAF-203ENST00000479537 C4AP0C0L4 1744 aa3.66□□□□□ -1.82
BRAF-203ENST00000479537 LAMA3Q16787 3333 aa3.66□□□□□ -1.82
BRAF-203ENST00000479537 WDR19Q8NEZ3 1342 aa3.66□□□□□ -1.82
BRAF-203ENST00000479537 USP42Q9H9J4 1324 aaKnown RBP3.66□□□□□ -1.82
BRAF-203ENST00000479537 USP54Q70EL1 1684 aa3.65□□□□□ -1.82
BRAF-203ENST00000479537 LYRM9A8MSI8 78 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 CHST1O43916 411 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 PSG2P11465 335 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 MGMTP16455 207 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 STOMP27105 288 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 MAS1LP35410 378 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 MRPL19P49406 292 aaKnown RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 STXBP1P61764 594 aaKnown RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 SLC25A11Q02978 314 aaKnown RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 ANKRD22Q5VYY1 191 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 ZNF530Q6P9A1 599 aaPredicted RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 TMEM220Q6QAJ8 160 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 MBOAT1Q6ZNC8 495 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 COMMD1Q8N668 190 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 TTC29Q8NA56 475 aaPredicted RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 LYPD6BQ8NI32 183 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 TEKT3Q9BXF9 490 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 MRPL37Q9BZE1 423 aaKnown RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 NCOR1P1Q9H4R4 102 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 AUNIPQ9H7T9 357 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 BEX1Q9HBH7 125 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 DDX18Q9NVP1 670 aaKnown RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 CCDC59Q9P031 241 aaKnown RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 CD84Q9UIB8 345 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 ZNF223Q9UK11 482 aaPredicted RBP3.65□□□□□ -1.83
BRAF-203ENST00000479537 PRUNE2Q8WUY3 3088 aa3.65□□□□□ -1.83
BRAF-203ENST00000479537 TRPM7Q96QT4 1865 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 ROCK1Q13464 1354 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 TRBV9A0A0B4J1U6 114 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 NCF1BA6NI72 391 aaPredicted RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 NCF1CA8MVU1 366 aaPredicted RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 SUPT3HB4E1H0 165 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 TMX2-CTNND1H3BSU7 103 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 CD5LO43866 347 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 SS18L1O75177 396 aaPredicted RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 FKBP6O75344 327 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 SRP72O76094 671 aaKnown RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 CCNB2O95067 398 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 RAB3DO95716 219 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 ADRB3P13945 408 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 HOXA9P31269 272 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 CSNK1EP49674 416 aaKnown RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 RAB9AP51151 201 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 CRISP1P54107 249 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 GGTLC2Q14390 218 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 PON3Q15166 354 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 PSMD5Q16401 504 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 KATNAL2Q8IYT4 538 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 ZNF433Q8N7K0 673 aaPredicted RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 EEF1AKMT3Q96AZ1 226 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 C8orf44Q96CB5 159 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 DNAJC1Q96KC8 554 aaKnown RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 XPO6Q96QU8 1125 aaKnown RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 MICU1Q9BPX6 476 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 RETNQ9HD89 108 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 WSB1Q9Y6I7 421 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 BRCA1P38398 1863 aaKnown RBP3.64□□□□□ -1.83
BRAF-203ENST00000479537 MAP3K19Q56UN5 1328 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 TTC41PQ6P2S7 1318 aa3.64□□□□□ -1.83
BRAF-203ENST00000479537 WNK3Q9BYP7 1800 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 IGHV3-64DA0A0J9YX35 117 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 C11orf94C9JXX5 98 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 NUPL2O15504 423 aaKnown RBP3.63□□□□□ -1.83
BRAF-203ENST00000479537 EIF4E2O60573 245 aaKnown RBP3.63□□□□□ -1.83
BRAF-203ENST00000479537 GNAO1P09471 354 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 MDKP21741 143 aaPredicted RBP3.63□□□□□ -1.83
BRAF-203ENST00000479537 F2RP25116 425 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 NAMPTP43490 491 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 CRISP3P54108 245 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 KRTAP10-3P60369 221 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 MXD1Q05195 221 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 ILKQ13418 452 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 WDR43Q15061 677 aaKnown RBP eCLIP3.63□□□□□ -1.83
BRAF-203ENST00000479537 HES5Q5TA89 166 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 HDDC2Q7Z4H3 204 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 TMEM150AQ86TG1 271 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 KRTAP11-1Q8IUC1 163 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 DUSP18Q8NEJ0 188 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 OR2A1Q8NGT9 310 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 OR4S2Q8NH73 311 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 DUS3LQ96G46 650 aaKnown RBP3.63□□□□□ -1.83
BRAF-203ENST00000479537 ZNF799Q96GE5 643 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 ACTR3CQ9C0K3 210 aaPredicted RBP3.63□□□□□ -1.83
BRAF-203ENST00000479537 TMEM165Q9HC07 324 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 PDP1Q9P0J1 537 aaPredicted RBP3.63□□□□□ -1.83
BRAF-203ENST00000479537 TBC1D24Q9ULP9 559 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 ST3GAL6Q9Y274 331 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 SLC17A4Q9Y2C5 497 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 ABCA12Q86UK0 2595 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 RAB3GAP2Q9H2M9 1393 aa3.63□□□□□ -1.83
BRAF-203ENST00000479537 VPS8Q8N3P4 1428 aa3.62□□□□□ -1.83
BRAF-203ENST00000479537 NCOR1O75376 2440 aa3.62□□□□□ -1.83
BRAF-203ENST00000479537 KIAA1551Q9HCM1 1747 aa3.62□□□□□ -1.83
BRAF-203ENST00000479537 ARHGAP21Q5T5U3 1957 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms